[Gate-users] Issues Running Exercise 5 (TLE) from dsarrut Gate Exercises

[David Sarrut]

Hello,

there was an issue with the downloaded data, see explanation in page
https://gitlab.in2p3.fr/david.sarrut/gate-exercices
Either use the zip files or clone the git repo with lfs option.

David

On Tue, May 23, 2017 at 12:17 AM, Akiv Jhirad <akivjh at gmail.com> wrote:

> Hi Gate users,
>
> I'm currently going through the tutorial by dsarrut (
> https://dsarrut.gitbooks.io/gate-exercises/content/ex5.html) but am
> unable to run the example properly.
>
> Here is the error:
>
> MetaImage: M_ReadElementsData: data not read completely
>      ideal = 3407872 : actual = 132
> GateVImageVolume.cc (l.363): The image contains HU indices out of range of
> the HU range found in data/phantom-HU2mat.txt
> min, max:-1050, 3001.
> min, max in image: 0, 31337
> Abort.
>
> Does anyone have an idea of how I can decrease the image range or have any
> other alternatives? Increasing the range of the phantom-HU2mat.txt file did
> not work since the file is written to during each run with the range -1050,
> 3001.
>
> --
> Best Regards,
> Akiv Jhirad
>
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> Gate-users at lists.opengatecollaboration.org
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>



-- 
David Sarrut, Phd
Directeur de recherche CNRS
CREATIS, UMR CNRS 5220, Inserm U1206
Centre de lutte contre le cancer Léon Bérard
28 rue Laënnec, 69373 Lyon cedex 08
Tel : 04 78 78 51 51 / 06 74 72 05 42
http://www.creatis.insa-lyon.fr/~dsarrut
_________________________________
 "2 + 2 = 5,  for extremely large values of 2"
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