[Gate-users] Compile gjs

Santos, Roque rsantost at vols.utk.edu
Tue Dec 15 02:53:15 CET 2015

Sorry, I made a mistake in my previous mail. I'm working in Ubuntu 14.04 (I said that I'was working with 10.04, but this was a typo). So my problems remain. 

Thank you for the help 

Sent from my iPad

> On Dec 14, 2015, at 9:13 AM, Alex Vergara Gil <alexvergaragil at gmail.com> wrote:
> My first advice would be to update your system to the last LTS which
> is 14.04, then try again and post again if the problem remains
> Regards
> Alex
> 2015-12-13 11:11 GMT-05:00, Santos, Roque <rsantost at vols.utk.edu>:
>> Hello,
>> I need help with gjs job splitter. I'm working in Ubuntu 10.04. I used Gate
>> in this platform and in Mac, and I noticed that in Mac Gate runs a little
>> faster. I need to increase the speed of the simulation, so I started to try
>> to use gjs.
>> At first I couldn't install it because my installation procedure oF GATE
>> does not generate env_gate.sh. (I look for the file in all my computer). I
>> had to use Geant4Config.sh instead.
>> Then, gjs wasn't able to compile, I don't know why. The error message was
>> "./src/GateMacfileParser.cc:41:26: error: 'getpid' was not declare in this
>> scope..."
>> In a forum I found that if you include <unistd.h> in the
>> GateMacfileParse.hh, you will be able to compile the code. I did that and
>> the code compiled.
>> However after that, when I run gjs I have the message " your macro file
>> given in parameter does not have any extension. Please give it the .mac
>> extension." I don't think is a problem of the extension because I'm writing
>> the name of mi file followed with ".mac". The command line that I'm using to
>> run gjs is: "./gjs -n 8 -cs inveonPET01.mac"
>> I'm a chemical engineer pursuing a graduate degree in nuclear engineering. I
>> don't have enough background in programming or compiling or using cmake,
>> etc. I really need help.
>> I would appreciate your help.
>> Greeting,
>> Roque
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>> Gate-users at lists.opengatecollaboration.org
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