[gate-users] GATE running problems

[Bing Bai]

Hello all,

I installed GATE on an AMD Opteron. It is a 64 bit machine, but to be 
consistent with the software versions posted on GATE website, I compiled 
everything in 32bit using -m32. Installation information:
Redhat Enterprise 4
gcc 3.4.3
Geant4.7.0p01
root 4.03/04
clhep 1.8.1.0
lmf 2.0
gate 2.2.0

Here is what happened:
First, when I run benchmarkPET, the results are fine, but I got a message:

[GateTrajectoryNavigator::FindAnnihilationGammasTrackID]  WARNING : 
positron found and photonID vector size: 4
GateAnalysis::RecordEndOfEvent : WARNING : photonID vector size > 2


Second, I simulated a F18 point source sealed in R=0.75mm sphere glass on 
a microPET scanner, got lots of warning messages like this:

[GateTrajectoryNavigator::FindAnnihilationGammasTrackID]  WARNING : 
positron found and photonID vector size: 1

and a couple of messages like this:

[GateTrajectoryNavigator::FindAnnihilationGammasTrackID]  WARNING : 
positron found and photonID vector size: 4
GateAnalysis::RecordEndOfEvent : WARNING : photonID vector size > 2

Finally it crashed after running for about 13hours.
I'd really appreciate if someone can give me some clue. 
Here is the final error message.

Thanks,
Bing

[GateTrajectoryNavigator::FindAnnihilationGammasTrackID]  WARNING : 
positron found and photonID vector size: 4
GateAnalysis::RecordEndOfEvent : WARNING : photonID vector size > 2

  *** Break *** segmentation violation
  Generating stack trace...
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
/usr/bin/addr2line: 'Gate': No such file
  0x0827695d in GateCoincidenceSorter::VerifCoincidencePulses(GatePulseList 
const*) + 0x1d from Gate
  0x08277bbb in 
GateCoincidenceSorter::ProcessSinglePulseList(GatePulseList*) + 0x6b from 
Gate
  0x0818a774 in GateDigitizer::Digitize() + 0x204 from Gate
  0x08199bfb in GateOutputMgr::RecordEndOfEvent(G4Event const*) + 0x8b from 
Gate
  0x0818ffb2 in GateEventAction::EndOfEventAction(G4Event const*) + 0x82 
from Gate
  0x085e28a9 in G4EventManager::DoProcessing(G4Event*) + 0x779 from Gate
  0x085afba8 in G4RunManager::DoEventLoop(int, char const*, int) + 0xb8 
from Gate
  0x085ad23f in G4RunManager::BeamOn(int, char const*, int) + 0x6f from 
Gate
  0x08181d80 in GateApplicationMgr::StartDAQ() + 0x120 from Gate
  0x081c7b23 in GateApplicationMgrMessenger::SetNewValue(G4UIcommand*, 
G4String) + 0x123 from Gate
  0x0874d1d3 in G4UIcommand::DoIt(G4String) + 0x363 from Gate
  0x087565c6 in G4UImanager::ApplyCommand(char const*) + 0x486 from Gate
  0x083859fd in G4UIterminal::ExecuteCommand(G4String) + 0x5d from Gate
  0x08385797 in G4UIterminal::SessionStart() + 0x67 from Gate
  0x08180132 in main + 0x352 from Gate
  0x00631e23 in __libc_start_main + 0xd3 from /lib/tls/libc.so.6
  0x0817f561 in TApplicationImp::ShowMembers(TMemberInspector&, char*) + 
0x9d from Gate
Aborted