[Gate-users] job splitting takes too much time

Ashok Tiwari tiwarias at yahoo.com
Fri Oct 23 20:17:35 CEST 2020


Hi Martin,
I don't have experience with the HT condor platform but after running the gjs command you should have a .split file in the current directory where you ran the gjs command and split macros in your .GC_DOT_GATE directory based on your installation. It should not take such a long time, I think it is a matter of ~secs (based on my experience). I don't have an idea about why it is taking too much time, but I suggest you to check the condor script based on available scripts in GATE. I am happy to send you my SGE cluster setting files if you want to compare the scripts to find out the culprit.
Thanks,Ashok Tiwari


   On Friday, 23 October 2020, 06:41:19 am GMT-4, Martin Sower <melkatib1 at gmail.com> wrote:  
 
 Hi,
I installed the gjs (job splitter) and gjm (job merger) as in the Gate User's guide and installed a Personal HTcondor as in   https://htcondor.readthedocs.io/en/stable/cloud-computing/using-annex-first-time.html#install-a-personal-htcondor with the tests passed successfully, and now I'm trying to split my simulation to 2 jobs, with the command   gjs  -numberofsplits 2 -clusterplatform condor -condorscript /home/..../Gate-8.2/cluster_tools/jobsplitter/script/condor.script mysim.mac, I'm getting the .split and mysim1.mac in the .GATE directory but nothing else, and the problem is that this command take too much long (1h before I force them to stop), so my question is: is it normal that this gjs command take such a long time? and what can be the origin of this problem?
thank you in advance for your help.Martin
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