[Gate-users] Help in DNA physics

Cassandra Miller cassandramiller at phas.ubc.ca
Thu Nov 19 19:21:01 CET 2020


Hi Noura,

Using the DNA physics list is relatively simple. The command is:

/gate/physics/addPhysicsList emDNAphysics

The caveat being, it ONLY works if you are using a specific material, 
G4_WATER:

/gate/nucleus/setMaterial G4_WATER

If you use regular water, it won't work, it has to be G4_WATER. You can 
also combine physics lists, for example if you have two spheres and 
sphere 2 doesn't require the dna list, you can do something like this:

/gate/sphere1/setMaterial G4_WATER
/gate/sphere2/setMaterial OtherMaterial

...

/gate/physics/addPhysicsListMixed emstandard_opt3_mixed_emdna
/gate/physics/SetDNAInRegion sphere1

/gate/physics/ConstructProcessMixed

And then sphere1 will be simulated using the dna list, and sphere 2 with 
the standard list. (if you google "/gate/physics/ConstructProcessMixed" 
you can find some more examples of this).

Best,
Cassandra

-- 

Cassandra Miller
PhD Student, Physics
Quantitative Radiomolecular Imaging and Therapy Lab
Department of Physics and Astronomy, University of British Columbia

On 2020-11-18 10:35 p.m., noura hbb wrote:
> Hello Gate users,
>
> I'm beginner in Gate and I want use DNA physics list for the electrons ? Please any help ?
>
>
> Thank you,
>
> Best Regards
>
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> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
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