[Gate-users] Installing Gate

[David Boersma]

Hi Muhammad,

In order to get Gate compiled with ITK, you also need to set the "ITK_DIR" variable. What value did you give to ccmake? It should be the path of a directory, typically of the form "/path/to/install/of/ITK/lib/cmake/ITK-X.Y" (where X.Y is the ITK version number). This directory should exist and on my own system (ITK version 4.13) it contains these files (plus a directory):

ITKConfig.cmake
ITKConfigVersion.cmake
itkImageIOFactoryRegisterManager.h.in
ITKModuleAPI.cmake
ITKTargets.cmake
ITKTargets-release.cmake
itkTransformIOFactoryRegisterManager.h.in
Modules/
UseITK.cmake

What is the value for ITK_DIR in your build? The exact contents of that directory may be a bit different if you are using a different ITK version, but should be kind of similar.

HTH,
David

________________________________
From: Muhammad Afzaal Sadaqat <muhammadafzaalsadaqat786 at gmail.com>
Sent: Tuesday, December 22, 2020 2:11 PM
To: David Boersma <david.boersma at acmit.at>
Subject: Re: [Gate-users] Installing Gate

I want to set ITK ON.


On Mon, Dec 21, 2020 at 11:38 PM David Boersma <david.boersma at acmit.at<mailto:david.boersma at acmit.at>> wrote:
Hi Muhammad,

It looks like you have set the "GATE_USE_ITK" flag to "ON" (otherwise the code would not try to include "gdcmFilename.hh"), and somehow the build system thought that your ITK installation was OK but now during the "make" step it looks like it isn't.

Do you absolutely need ITK for something (e.g. do you need for RTK functionality)? Because if not, then the easiest fix is to set "GATE_USE_ITK" to "OFF" in ccmake and then try again to compile.

/David
________________________________
From: Gate-users <gate-users-bounces at lists.opengatecollaboration.org<mailto:gate-users-bounces at lists.opengatecollaboration.org>> on behalf of Carlotta Trigila <ctrigila at ucdavis.edu<mailto:ctrigila at ucdavis.edu>>
Sent: Monday, December 21, 2020 9:56 AM
To: Muhammad Afzaal Sadaqat <muhammadafzaalsadaqat786 at gmail.com<mailto:muhammadafzaalsadaqat786 at gmail.com>>; Gate-users at lists.opengatecollaboration.org<mailto:Gate-users at lists.opengatecollaboration.org> <Gate-users at lists.opengatecollaboration.org<mailto:Gate-users at lists.opengatecollaboration.org>>
Subject: Re: [Gate-users] Installing Gate

I Muhammed,

I don't know if you were able to solve your problem. However, having a look at the screen you sent, I have the impression you are missing some file in the include folder. I verified that I actually have them in mine.

I would suggest downloading GATEv9 again from the openGATE collaboration website. Once unpacked and before installing, please verify if you have the GateDICOMImahe.hh missing file inside /Gate-v9/source/general/include/.

Let me know if it works or if you need help.

Carlotta


--

Carlotta Trigila, PhD


Department of Biomedical Engineering – GBSF 2505

University of California, Davis

451 East Health Sciences Drive

Davis, CA 95616

ctrigila at ucdavis.edu <http://ccjliu@ucdavis.edu>



________________________________
From: Gate-users <gate-users-bounces at lists.opengatecollaboration.org<mailto:gate-users-bounces at lists.opengatecollaboration.org>> on behalf of Muhammad Afzaal Sadaqat <muhammadafzaalsadaqat786 at gmail.com<mailto:muhammadafzaalsadaqat786 at gmail.com>>
Sent: Thursday, December 17, 2020 9:09 AM
To: Gate-users at lists.opengatecollaboration.org<mailto:Gate-users at lists.opengatecollaboration.org> <Gate-users at lists.opengatecollaboration.org<mailto:Gate-users at lists.opengatecollaboration.org>>
Subject: [Gate-users] Installing Gate

Hello gate users! While installing gate from this link
https://opengate.readthedocs.io/en/latest/compilation_instructions.html#compilation-instructions-label
i got this error message

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