[Gate-users] Core dumped, Error, Failed to create output

[Somayeh Asadi]

Dear Gate User

I want to run the ready program in Gate with the name of Thermal being in the folder of Imaging/Thermal in the subfolder of GateContrib-master. In the program, It was asked for the two outputs name: Mobydose.mhd   and  Statistics.txt  written in the part related to Actor.

/vis/open    VRML2FILE
/vis/drawVolume
/vis/viewer/set/viewpointThetaPhi   90 0
/vis/viewer/zoom                    1
/vis/drawVolume
/vis/viewer/flush
/vis/drawVolume
/tracking/storeTrajectory           1
/vis/scene/add/trajectories
/vis/scene/endOfEventAction         accumulate  10
#################################################
/gate/actor/addActor ThermalActor        nano
/gate/actor/nano/save                    output/Mobydose.mhd
/gate/actor/nano/attachTo                Mouse
/gate/actor/nano/stepHitType             random
/gate/actor/nano/setPosition             0. 0. 0. cm
/gate/actor/nano/setVoxelSize            0.25 0.25 0.25 mm
/gate/actor/nano/setDiffusionTime               2 s
/gate/actor/nano/setThermalDiffusivity         0.190 mm2/s
/gate/actor/nano/setBloodPerfusionRate 0.004
/gate/actor/nano/setBloodDensity           1.06E-6
/gate/actor/nano/setBloodHeatCapacity     3.6E6
/gate/actor/nano/setTissueDensity         1.04E-6
/gate/actor/nano/setTissueHeatCapacity     3.65E6
/gate/actor/nano/setSimulationScale         1E10
/gate/actor/nano/setNumberOfTimeFrames          60
/gate/actor/addActor SimulationStatisticActor Myactor
/gate/actor/Myactor/save    output/Statistics.txt
/gate/actor/Myactor/attachTo                Mouse
/gate/actor/Myactor/save     EveryNSeconds              0.5



When the program is running, core dumped accrues, n output created and the error in below is received:
----------------------------------------------------------------------------------------------------------------
terminate called after throwing an instance of 'itk::ImageFileReaderException'
  what():  /home/BuildFiles/ITK/InsightToolkit-5.0.0-Source/Modules/IO/ImageBase/include/itkImageFileReader.hxx:136:
 Could not create IO object for reading file output/Mobydose-AbsorptionMap.mhd
  Tried to create one of the following:
    GDCMImageIO
  You probably failed to set a file suffix, or
    set the suffix to an unsupported type.

Aborted (core dumped)
----------------------------------------------------------------------------------------------------------------

 Has any person had the same problem and know about the meaning of this error?
"I have installed ITK and put the part related to the optical photon in ON".
Thank you very much for your reading and any suggestion.

Sincere Wishes,




Somayeh Asadi (PhD)
Postdoctoral Researcher
Department of Mechanical Engineering
Politecnico di Milano, Italy

Via Giuseppe La Masa,1
20156 - Milano - Italy
phone: +39 0223998572

somayeh.asadi at polimi.it

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