[Gate-users] Σχετ: [Issue: CT simulation with GPU]

Constantinos P. Chatzipapas, MSc konhat88 at yahoo.gr
Wed Feb 22 23:03:49 CET 2017


Hello,There are a lot of files to check, but try changing your patient.mac code using something similar to:
/gate/world/daughters/name                      patient
/gate/world/daughters/insert                    ImageNestedParametrisedVolume
/gate/geometry/setMaterialDatabase              data/patient-HUmaterials.db
/gate/patient/geometry/SetHUToMaterialFile      data/patient-HU2mat.txt
/gate/patient/geometry/SetImage                 data/patient-2mm.mhd
/gate/patient/placement/setTranslation          0 0 0 mm

Changing your image to .mhd and ImageNestedParametrisedVolume is the only way to run CT on GATE with GPU, I think.


Best Regards,Konstantinos
 -----------------------------------Konstantinos Chatzipapas
Medical Physicist, MSc
University of Patras
web page: www.physicsmag.com 

    Στις 1:44 μ.μ. Τετάρτη, 22 Φεβρουαρίου 2017, ο/η Wonjoong Cheon <wonjoongcheon at gmail.com> έγραψε:
 

 Dear All user of OpenGate. 
My name is Wonjoong Jason Cheon, and I am a graduate school student in South Korea. 
I wrote a code for Cone-Beam CT Simulation with DICOM 
1. CBCT code was written from example_CT 2. Import the dicom files which is converted h33, i33 (interfile format)
https://github.com/wjcheon/CBCT_Gate_GPU


Now, I want to perform the simulation (CBCT) with GPU 1. I have installed GATE with GPU (Nvidia)2. SPECT_GPU is working, well. (properly launched GPU)3. I have read the GATE-USER-GUIDE V7.2
But, I could not success....
Is there anyone to help me ? for performing MC simulation with GPU?
Please let me know how can i solve this problem. 
All of the code is  uploaded in GitHub. https://github.com/wjcheon/CBCT_Gate_GPU

Thanks your attention. 
Best regards Wonjoong Jason Cheon. 


-- 
--
Wonjoong Cheon, M.S and Ph.D Integrated Program
Samsung Advanced Institute for Health Science & Technology, SungKyunKwan University.Medical Physics Lab. - SUMP Lab.
Samsung Medical Center (135-710) 81 Irwon-ro Gangnam-gu, Seoul, Korea.
C.P)+82-10-4514-5249Tel)+82-2-3410-2444
B.S. Dept. of Radiological Science, Yonsei University.
B.S. Dept. of Information and Communication Engineering , Yonsei University. (*dual major)
E-mail: wonjoongcheon at gmail.com // wonjoong.c at skku.edu
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