[Gate-users] "gate/ecat/placement/setTranslation" COMMAND NOT FOUND

[rachid ayad]

  Dear All, I am also new in gate and I successfully downloaded gate-7.2 (I
did not install gate 8.0 because I have geant4 version less than 10.3). I
went to .../gate-../examples/example_PET and run "Gate PET_Ecat_System.mac"
where I saw a display with many tracks, reconstructed in a cylindrical PET
geometry.
The program output two files:

1) yourSinogram.S: A ECAT7 sinogram file
2) YourPETSimu.root: A ROOT file

Now I would like to see images like we see in hospitals and I searched the
web and found that STIR can do it and I installed this software but the
STIR-user guide is really long and the STIR utilities in ../bin are a lot
and is hard to choose from them, So maybe you can help me to reconstruct
and display images from Sinogram and ROOT output files.

Thank you, Rachid


On Fri, Apr 21, 2017 at 7:32 PM, Machiel Kolstein <mkolstein at ifae.es> wrote:

>
> Hi Seb again,
>
> I just saw the "/gate_v8.0/benchmarks/benchPET/"  directory.
> I am running the "benchPET.mac" macro now (if I am understanding it
> correctly it's simulating a source for 240 seconds, so it will take some
> while, I guess). It seems to run fine, without complaints.
> Then again, none of the macros involved seem to use "ecat7", so maybe
> that's why? Is there a way to test that "ecat7" is correctly included in
> the GATE compilation?
>
> Cheers,
>
> Machiel
>
> On Fri, Apr 21, 2017 at 6:09 PM, Machiel Kolstein <mkolstein at ifae.es>
> wrote:
>
>>
>> Hi Seb,
>>
>> I am sorry, I am not sure I understand what you mean.
>> Are you saying that with your installation, "Gate macros/Geometry.mac"
>> works?
>> What do you mean with "starting with the PET benchmark"? Is that some
>> other exercise?
>> My feeling (I might be completely wrong) is that somehow Gate does not
>> recognize the "ecat" command. Is there some easy to check that Gate does
>> recognize "ecat"?
>>
>> Cheers,
>>
>> Machiel
>>
>>
>> On Fri, Apr 21, 2017 at 5:52 PM, JAN Sebastien <sebastien.jan at cea.fr>
>> wrote:
>>
>>> Hi Machiel
>>>
>>>
>>>
>>> I just tested this exercise with the V8.0 and it works well…
>>>
>>> Start with the PET benchmark to be sure that your install is correct.
>>>
>>>
>>>
>>> Cheers
>>>
>>> Seb
>>>
>>>
>>>
>>> *De :* Gate-users [mailto:gate-users-bounces at lis
>>> ts.opengatecollaboration.org] *De la part de* Machiel Kolstein
>>> *Envoyé :* vendredi 21 avril 2017 16:59
>>> *À :* gate-users at lists.opengatecollaboration.org
>>> *Objet :* [Gate-users] "gate/ecat/placement/setTranslation" COMMAND NOT
>>> FOUND
>>>
>>>
>>>
>>>
>>> Hi,
>>>
>>>
>>>
>>> I just succesfully installed GATE version 8.0.
>>>
>>> To learn how to use GATE, I also downloaded an exercise from this page:
>>>
>>>   http://www.opengatecollaboration.org/Materials2015/Practical
>>> Exercises2015/PET
>>>
>>>
>>>
>>> However, when I try to run "Gate macros/Geometry.mac", I get the
>>> following error:
>>>
>>> [G4-cerr] ***** COMMAND NOT FOUND </gate/ecat/placement/setTranslation
>>> 0.0 0.0 0.0 cm> *****
>>>
>>>
>>>
>>> ​This is even though I installed "ecat7" and did a ccmake on GATE with
>>> "GATE_USE_ECAT7" is ON and the "ECAT7_HOME" directory is set.
>>>
>>>
>>>
>>> Cheers,
>>>
>>>
>>>
>>> Machiel
>>>
>>>
>>>
>>>
>>>
>>>
>>>
>>> --
>>>
>>> Avís - Aviso - Legal Notice - (LOPD) - http://legal.ifae.es
>>>
>>>
>>> Avís - Aviso - Legal Notice - (LOPD) - http://legal.ifae.es
>>>
>>
>>
>>
>> --
>> Avís - Aviso - Legal Notice - (LOPD) - http://legal.ifae.es
>>
>
>
>
> --
> Avís - Aviso - Legal Notice - (LOPD) - http://legal.ifae.es
>
> Avís - Aviso - Legal Notice - (LOPD) - http://legal.ifae.es
>
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-- 
Dr. Rachid Ayad
Department of Physics, Faculty of Science
University Of Tabuk
P.O. Box 2072
Tabuk 71451
Kingdom Of Saudi Arabia
Tel: +966560296632

-- 


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