[Gate-users] number of runs/slices

[Débora Salvado]

See document in attachment for the mac file.
The geometry part is basically a SPECT system (1 detector+collimator), 1
aluminum shell around it and 1 water cylinder in the FOV.
The missing parameters are:
/control/alias tracerActivity 185000000.0
/control/alias detEnergyReference 122.
/control/alias simTime 60.

Thanks & regards,

Debora Salvado, MSc
PhD Student
University College London
INM, UCLH, (T-5) 235 Euston Road
London NW1 2BU
UK

2015-05-01 12:03 GMT+01:00 J.J.M. Kouwenberg <j.kouwenberg at erasmusmc.nl>:

> Dear Debora,
>
> Can you send us (part of) the .mac file that you are using? That makes it
> easier to find the exact issue.
>
> With kind regards,
>
> Jasper J.M. Kouwenberg
> Medical Physics Graduate student
> Nuclear Medicine
>
> E-mail j.kouwenberg at erasmusmc.nl | Phone +316 2532 9809
>
> ________________________________________
> From: gate-users-bounces at lists.opengatecollaboration.org [
> gate-users-bounces at lists.opengatecollaboration.org] on behalf of Débora
> Salvado [debbiesal at gmail.com]
> Sent: 01 May 2015 12:25
> To: <gate-users at lists.opengatecollaboration.org>
> Subject: [Gate-users] number of runs/slices
>
> Dear GATE users,
>
> Using the same macro and one source of activity I get an output with
> "slice 0 from 0 to 60 seconds".
> In other simulations, adding more sources to the previous macro, I get an
> output with "slice 0 from 0 to 60 seconds", "slice 1 from 60 to 60 seconds"
> and "slice 2 from 60 to 0 seconds", and in between each message it looks
> like the simulation should finish (see below for the output I get in the
> terminal). Are these simulations running correctly? Or is there something
> wrong? I get my root files, but I wonder if the data in them is correct...
> Help!
>
> See below for the strange output messages :
>
> [Acquisition-0] ============= Acquisition starts! =============
> [Acquisition-0] Simulation start time = 0 sec
> [Acquisition-0] Simulation end time   = 60 sec
> [Acquisition-0] Simulation will have  = 1 run(s)
> ----------------------------------------
> [Acquisition-0] Slice 0 from 0 to 60 s [slice=60 s], final stop at 60 s.
> (information about interactions and registered couples)
> ===================================================================
>  clearing up the projection data matrices ... done
> Start Run processing.
> Run terminated.
> Run Summary
>   Number of events processed : 2147483647
>   User=83328s Real=83280.4s Sys=6.73s
> [Acquisition-0] Slice 1 from 60 to 60 s [slice=0 s], final stop at 60 s.
> (information about interactions and registered couples)
> ====================================================================
>  clearing up the projection data matrices ... done
> Start Run processing.
>  <!> *** WARNING *** <!>  Warning in GateApplicationMgr::GetTimeSlice,
> run=1 is greater than the list of slices. Do nothing
>
> Run terminated.
> Run Summary
>   Number of events processed : 2147483647
>   User=83496.4s Real=83442s Sys=0.63s
> [Acquisition-0] Slice 2 from 60 to 0 s [slice=0 s], final stop at 60 s.
> (information about interactions and registered couples)
> ====================================================================
>  clearing up the projection data matrices ... done
> Start Run processing.
>  <!> *** WARNING *** <!>  Warning in GateApplicationMgr::GetTimeSlice,
> run=2 is greater than the list of slices. Do nothing
> GateApplicationMgr.cc (l.218): Error in GateApplicationMgr::GetTimeSlice,
> run=2
> WARNING - Attempt to delete the physical volume store while geometry
> closed !
> WARNING - Attempt to delete the logical volume store while geometry closed
> !
> WARNING - Attempt to delete the solid store while geometry closed !
> WARNING - Attempt to delete the region store while geometry closed !
>
>
> Regards,
> Débora
>
> Debora Salvado, MSc
> PhD Student
> University College London
> INM, UCLH, (T-5) 235 Euston Road
> London NW1 2BU
> UK
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.opengatecollaboration.org/mailman/private/gate-users/attachments/20150501/d8429c6b/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: mainGATEusers.mac
Type: image/mac
Size: 8131 bytes
Desc: not available
URL: <http://lists.opengatecollaboration.org/mailman/private/gate-users/attachments/20150501/d8429c6b/attachment-0001.bin>