<div dir="ltr"><div><div>See document in attachment for the mac file.<br></div>The geometry part is basically a SPECT system (1 detector+collimator), 1 aluminum shell around it and 1 water cylinder in the FOV.<br>The missing parameters are:<br>/control/alias tracerActivity 185000000.0<br>/control/alias detEnergyReference 122.<br>/control/alias simTime 60.<br><br></div>Thanks & regards,<br></div><div class="gmail_extra"><br clear="all"><div><div class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><span style="border-collapse:separate;color:rgb(0,0,0);font-family:Helvetica;font-style:normal;font-variant:normal;font-weight:normal;letter-spacing:normal;line-height:normal;text-align:-webkit-auto;text-indent:0px;text-transform:none;white-space:normal;word-spacing:0px;border-spacing:0px"></span><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif"></span><span style="font-family:tahoma,sans-serif">Debora Salvado, MSc</span></span><br><div><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif">PhD Student<br></span></span></div><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif">University College London<br>INM, UCLH, </span></span><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif"><span><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif"> (T-5) </span></span></span>235 Euston Road<br></span></span><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif">London NW1 2BU<br></span></span><span style="color:rgb(7,55,99)"><span style="font-family:tahoma,sans-serif">UK</span></span><span style="color:rgb(12,52,61)"><span style="font-family:tahoma,sans-serif"></span></span><br></div></div></div></div></div></div> <br><div class="gmail_quote">2015-05-01 12:03 GMT+01:00 J.J.M. Kouwenberg <span dir="ltr"><<a href="mailto:j.kouwenberg@erasmusmc.nl" target="_blank">j.kouwenberg@erasmusmc.nl</a>></span>:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Dear Debora,<br> <br> Can you send us (part of) the .mac file that you are using? That makes it easier to find the exact issue.<br> <br> With kind regards,<br> <br> Jasper J.M. Kouwenberg<br> Medical Physics Graduate student<br> Nuclear Medicine<br> <br> E-mail <a href="mailto:j.kouwenberg@erasmusmc.nl">j.kouwenberg@erasmusmc.nl</a> | Phone <a href="tel:%2B316%202532%209809" value="+31625329809">+316 2532 9809</a><br> <br> ________________________________________<br> From: <a href="mailto:gate-users-bounces@lists.opengatecollaboration.org">gate-users-bounces@lists.opengatecollaboration.org</a> [<a href="mailto:gate-users-bounces@lists.opengatecollaboration.org">gate-users-bounces@lists.opengatecollaboration.org</a>] on behalf of Débora Salvado [<a href="mailto:debbiesal@gmail.com">debbiesal@gmail.com</a>]<br> Sent: 01 May 2015 12:25<br> To: <<a href="mailto:gate-users@lists.opengatecollaboration.org">gate-users@lists.opengatecollaboration.org</a>><br> Subject: [Gate-users] number of runs/slices<br> <div class="HOEnZb"><div class="h5"><br> Dear GATE users,<br> <br> Using the same macro and one source of activity I get an output with "slice 0 from 0 to 60 seconds".<br> In other simulations, adding more sources to the previous macro, I get an output with "slice 0 from 0 to 60 seconds", "slice 1 from 60 to 60 seconds" and "slice 2 from 60 to 0 seconds", and in between each message it looks like the simulation should finish (see below for the output I get in the terminal). Are these simulations running correctly? Or is there something wrong? I get my root files, but I wonder if the data in them is correct... Help!<br> <br> See below for the strange output messages :<br> <br> [Acquisition-0] ============= Acquisition starts! =============<br> [Acquisition-0] Simulation start time = 0 sec<br> [Acquisition-0] Simulation end time = 60 sec<br> [Acquisition-0] Simulation will have = 1 run(s)<br> ----------------------------------------<br> [Acquisition-0] Slice 0 from 0 to 60 s [slice=60 s], final stop at 60 s.<br> (information about interactions and registered couples)<br> ===================================================================<br> clearing up the projection data matrices ... done<br> Start Run processing.<br> Run terminated.<br> Run Summary<br> Number of events processed : 2147483647<br> User=83328s Real=83280.4s Sys=6.73s<br> [Acquisition-0] Slice 1 from 60 to 60 s [slice=0 s], final stop at 60 s.<br> (information about interactions and registered couples)<br> ====================================================================<br> clearing up the projection data matrices ... done<br> Start Run processing.<br> <!> *** WARNING *** <!> Warning in GateApplicationMgr::GetTimeSlice, run=1 is greater than the list of slices. Do nothing<br> <br> Run terminated.<br> Run Summary<br> Number of events processed : 2147483647<br> User=83496.4s Real=83442s Sys=0.63s<br> [Acquisition-0] Slice 2 from 60 to 0 s [slice=0 s], final stop at 60 s.<br> (information about interactions and registered couples)<br> ====================================================================<br> clearing up the projection data matrices ... done<br> Start Run processing.<br> <!> *** WARNING *** <!> Warning in GateApplicationMgr::GetTimeSlice, run=2 is greater than the list of slices. Do nothing<br> GateApplicationMgr.cc (l.218): Error in GateApplicationMgr::GetTimeSlice, run=2<br> WARNING - Attempt to delete the physical volume store while geometry closed !<br> WARNING - Attempt to delete the logical volume store while geometry closed !<br> WARNING - Attempt to delete the solid store while geometry closed !<br> WARNING - Attempt to delete the region store while geometry closed !<br> <br> <br> Regards,<br> Débora<br> <br> Debora Salvado, MSc<br> PhD Student<br> University College London<br> INM, UCLH, (T-5) 235 Euston Road<br> London NW1 2BU<br> UK<br> </div></div></blockquote></div><br></div>