[Gate-users] Error in GATE simulation on a Cluster

[André Miguel Monteiro]

Dear GATE users,


I am trying to run a simulation on a sge cluster platform, but I am getting an error:



[G4]
[G4] *************************************************************
[G4]  Geant4 version Name: geant4-09-04-patch-04    (13-April-2012)
[G4]                       Copyright : Geant4 Collaboration
[G4]                       Reference : NIM A 506 (2003), 250-303
[G4]                             WWW : http://cern.ch/geant4
[G4] *************************************************************
[G4]
[Core-0] Initialization of geometry
[Core-0] Initialization of physics
[Core-0] Initialization of actors
[Core-0]
[Core-0] **********************************************************************
[Core-0]  GATE version name: gate_v6.1
[Core-0]                     Copyright : OpenGATE Collaboration
[Core-0]                     Reference : Phys. Med. Biol. 49 (2004) 4543-4561
[Core-0]                     Reference : Phys. Med. Biol. 56 (2011) 881-901
[Core-0]                     WWW : http://www.opengatecollaboration.org/
[Core-0] **********************************************************************
[Core-0]
[Core-0] Starting macro /gridware/workdir/ammonteiro/.Gate/March19_1/March19_10.mac
[G4]  Rmin/gate/tumor1/geometry/setRmin


List of Enabled processes:


   ===  Process: RayleighScattering  ===
Particle: gamma
    * Model(s):
       - PenelopeModel

   ===  Process: PhotoElectric  ===
Particle: gamma
    * Model(s):
       - StandardModel
   ===  Process: MultipleScattering  ===
Particle: e-

   ===  Process: ElectronIonisation  ===
Particle: e+
    * Model(s):
       - <!> *** Warning *** <!> No model selected!
Particle: e-
    * Model(s):
       - StandardModel

   ===  Process: Compton  ===
Particle: gamma
    * Model(s):
       - PenelopeModel
 ===  Process: Bremsstrahlung  ===
Particle: e+
    * Model(s):
       - <!> *** Warning *** <!> No model selected!
Particle: e-
    * Model(s):
       - StandardModel
List of initialized processes:?



[G4-cerr] ***** COMMAND NOT FOUND <^M> *****
[Gate] Sorry, error in a macro command : abort.


However when I run it on my PC the simulation goes well.

What is the problem?

Thank you,

André





--------------------------------
MSc Student in Biomedical and Biophysics Engineering at Faculty of Sciences of the University of Lisbon

Institute of Biophysics and Biomedical Engineering
Faculty of Sciences, University of Lisbon
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1749-016 Lisbon

Room Office: 1.02
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Email: ammonteiro at fc.ul.pt
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