[Gate-users] Gate7.o simulation problem

Wed Sep 3 06:39:47 CEST 2014

Hi All,
I'm trying to run my minigammacamera simulation but i have problem with
that. It looks like i'm able to run simulation but after 4 runs everything
stops and i get no results (no graphs, outputs...). Can anybody help me
what is wrong?
Thanks in advance

mknap at mknap-HP:~$ cd Gate/
mknap at mknap-HP:~/Gate$ source your_file.bashrc
mknap at mknap-HP:~/Gate$ Gate --qt minigamma1pointsourceoncollimator1.mac
[G4]
[G4] *************************************************************
[G4]  Geant4 version Name: geant4-09-06-patch-03    (14-March-2014)
[G4]                       Copyright : Geant4 Collaboration
[G4]                       Reference : NIM A 506 (2003), 250-303
[G4]                             WWW : http://cern.ch/geant4
[G4] *************************************************************
[G4]
[Core-0] Initialization of geometry
[Core-0] Initialization of physics
[Physic-0] WARNING: manual physic lists are being deprecated.
Please, use physic list builder mechanism instead. Related documentation
can be found at:
http://wiki.opengatecollaboration.org/index.php/Users_Guide_V7.0:Setting_up_the_physics
[Core-0] Initialization of actors
[G4] Available UI session types: [ Qt, GAG, tcsh, csh ]
[Core-0]
[Core-0]
**********************************************************************
[Core-0]  GATE version name: gate_v7.0

[Core-0]                     Copyright : OpenGATE Collaboration

[Core-0]                     Reference : Phys. Med. Biol. 49 (2004)
4543-4561
[Core-0]                     Reference : Phys. Med. Biol. 56 (2011) 881-901

[Core-0]                     WWW : http://www.opengatecollaboration.org

[Core-0]
**********************************************************************
[Core-0]
[Core-0] You are using Geant4 version 9.6.3
[Core-0] Starting macro minigamma1pointsourceoncollimator1.mac
[Physic-0] The following Geant4's physic-list is enabled :emstandard
[Acquisition-0]
[Acquisition-0] ============= Source initialization =============
[Acquisition-0]
[Acquisition-0] ============= Acquisition starts! =============
[Acquisition-0] Simulation start time = 0 sec
[Acquisition-0] Simulation end time   = 150 sec
[Acquisition-0] Simulation will have  = 4 run(s)

----- HepJamesRandom engine status -----
 Initial seed = 669708517
 u[] = 0.313493 0.22101 0.720638 0.288275 0.209104 0.961876 0.0185378
0.767277 0.570899 0.11677 0.585697 0.361668 0.499346 0.969958 0.659357
0.470614 0.232287 0.851241 0.27455 0.788571 0.407255 0.205312 0.558045
0.841456 0.443543 0.0437512 0.20597 0.975022 0.180286 0.842097 0.240617
0.115375 0.0104213 0.86239 0.254429 0.284886 0.114014 0.250714 0.477909
0.527364 0.887455 0.402326 0.5341 0.418133 0.107406 0.124517 0.302133
0.489961 0.8011 0.598657 0.398494 0.285134 0.133646 0.956609 0.548981
0.0394724 0.830412 0.922722 0.527004 0.588913 0.129604 0.169863 0.043967
0.0808861 0.801898 0.583084 0.269808 0.84379 0.235689 0.208139 0.683603
0.275 0.411587 0.134052 0.253045 0.356203 0.629278 0.233236 0.444437
0.502942 0.77252 0.00816381 0.210178 0.938382 0.894515 0.511199 0.913346
0.907528 0.240269 0.448999 0.814368 0.13479 0.692496 0.707161 0.983838
0.703152 0.403158
 c = 0.652903, cd = 0.456233, cm = 1
 i97 = 93, u[i97] = 0.707161
 j97 = 29, u[j97] = 0.842097
----------------------------------------
[Acquisition-0] Slice 0 from 0 to 37.5 s [slice=37.5 s], final stop at 150
s.
[Acquisition-0] Slice 1 from 37.5 to 75 s [slice=37.5 s], final stop at 150
s.
[Acquisition-0] Slice 2 from 75 to 112.5 s [slice=37.5 s], final stop at
150 s.
[Acquisition-0] Slice 3 from 112.5 to 150 s [slice=37.5 s], final stop at
150 s.
[Core-0] End of macro minigamma1pointsourceoncollimator1.mac

And after simulation i get this:

WARNING: The vis manager will keep up to 100 events.

This may use a lot of memory.

It may be changed with, e.g., "/vis/scene/endOfEventAction accumulate 10".

WARNING: The vis manager will keep up to 10000 events.

This may use a lot of memory.

It may be changed with, e.g., "/vis/scene/endOfEventAction accumulate 10".

GateDetectorConstruction::insertARFSD entered

created a ARF Sensivitive Detector

created command /gate/systems/SPECThead/arf/setARFStage

Rmin/gate/Phantom/geometry/setRmin

Rmin/gate/movsource/geometry/setRmin

Confirming confinement to volume 'movsource_P_phys'...

**** Error: Volume does not exist ****

Ignoring confine condition

### === Deexcitation model UAtomDeexcitation is activated for 1 region:

DefaultRegionForTheWorld

### === G4UAtomicDeexcitation::InitialiseForNewRun()

### === PIXE model for hadrons: Empirical 1

### === PIXE model for e+-: Livermore 1

### === Deexcitation model UAtomDeexcitation is activated for 1 region:

DefaultRegionForTheWorld

### === G4UAtomicDeexcitation::InitialiseForNewRun()

### === PIXE model for hadrons: Empirical 1

### === PIXE model for e+-: Livermore 1

WARNING: G4VisManager::EndOfEvent: Automatic event keeping suspended.

The number of events exceeds the maximum, 10000, that can be kept by the
vis manager.

WARNING: G4VisManager::EndOfRun: Automatic event keeping has been suspended.

The number of events in the run exceeded the maximum, 10000, that can be
kept by the vis manager.

The number of events kept by the vis manager can be changed with

"/vis/scene/endOfEventAction accumulate <N>", where N is the

maximum number you wish to allow. N < 0 means "unlimited".

10000 events have been kept for refreshing and/or reviewing.

### === Deexcitation model UAtomDeexcitation is activated for 1 region:

DefaultRegionForTheWorld

### === G4UAtomicDeexcitation::InitialiseForNewRun()

### === PIXE model for hadrons: Empirical 1

### === PIXE model for e+-: Livermore 1

WARNING: G4VisManager::EndOfRun: Automatic event keeping has been suspended.

The number of events in the run exceeded the maximum, 10000, that can be
kept by the vis manager.

The number of events kept by the vis manager can be changed with

"/vis/scene/endOfEventAction accumulate <N>", where N is the

maximum number you wish to allow. N < 0 means "unlimited".

10000 events have been kept for refreshing and/or reviewing.

### === Deexcitation model UAtomDeexcitation is activated for 1 region:

DefaultRegionForTheWorld

### === G4UAtomicDeexcitation::InitialiseForNewRun()

### === PIXE model for hadrons: Empirical 1

### === PIXE model for e+-: Livermore 1

WARNING: G4VisManager::EndOfRun: Automatic event keeping has been suspended.

The number of events in the run exceeded the maximum, 10000, that can be
kept by the vis manager.

The number of events kept by the vis manager can be changed with

"/vis/scene/endOfEventAction accumulate <N>", where N is the

maximum number you wish to allow. N < 0 means "unlimited".

10000 events have been kept for refreshing and/or reviewing.

### === Deexcitation model UAtomDeexcitation is activated for 1 region:

DefaultRegionForTheWorld

### === G4UAtomicDeexcitation::InitialiseForNewRun()

### === PIXE model for hadrons: Empirical 1

### === PIXE model for e+-: Livermore 1

WARNING: G4VisManager::EndOfRun: Automatic event keeping has been suspended.

The number of events in the run exceeded the maximum, 10000, that can be
kept by the vis manager.

The number of events kept by the vis manager can be changed with

"/vis/scene/endOfEventAction accumulate <N>", where N is the

maximum number you wish to allow. N < 0 means "unlimited".

10000 events have been kept for refreshing and/or reviewing.

Z wyrazami szacunku
Michał Knap
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