[Gate-users] Gate 6.1 installation problem

Mon Dec 16 10:01:36 CET 2013

Hi Michał,

Probably, in your case, the problem with installation of GATE 6.1 is caused
by your installation of Geant4.
You should install Geant with wersion 4.9.4.p04.

After that, you should prepare envgate.sh file in directory with source of
gate with following content:

export G4SYSTEM=Linux-g++
export G4INSTALL=/path/to/source/of/geant4
export G4LIBS=/path/to/installation/of/geant4/lib/geant4/Linux-g++"
export G4LEDATA=/path/to/geant4/data/G4EMLOW6.19"
export G4LEVELGAMMADATA=/path/to/geant4/data/PhotonEvaporation2.1"
export G4VERSION=9.4
export ROOTSYS=/path/to/root/installation
export GATEHOME=/path/to/source/of/gate
source $GATEHOME/env_gate.sh

Proper setting of above variables is very important.
When you will prepare this file, then type in terminal "source envgate.sh"
and then make.
You also need to have gmake installed in your system.
Let me know if it helped.

Best regards,
Paweł Kowalski,
National Centre for Nuclear Research,
Świerk Computing Centre

2013/12/16 Hermann Fuchs <hermann.fuchs at meduniwien.ac.at>

>  Actually, not any more.
> It seems the problem is not really related to the source files. Perhaps
> something is wrong with your make/cmake configuration or your environment
> variables...
>
> Please keep me posted. Please keep also the mailing list in the loop, in
> case somebody has the same problem.
>
> Cheers,
> Hermann
>
> On Mon, 2013-12-16 at 09:05 +0100, Michal Knap wrote:
>
> Hello,
>
>  I've been trying to install GATE using files You've send me but i stil
> have the same problem. During compilation of GATE i get this error:
>
>  "...
>
>  Making dependency for file src/GateSingleScatteringPB.cc ...
> include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateRTVPhantom.cc ...
> src/GateRTVPhantom.cc:2:35: fatal error: GateMaterialDatabase.hh: No such
> file or directory
> compilation terminated.
> Making dependency for file src/GateIonInelasticPB.cc ...
> include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateSourceVoxelImageReaderMessenger.cc ...
> include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateProtonInelasticPB.cc ...
> include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateComptonPB.cc ...
> include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateHadronCapturePB.cc ...
> include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory
> compilation terminated.
> Making dependency for file src/GateEMStandardProcessMessenger.cc ...
> include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory
> compilation terminated.
> make[1]: *** No rule to make target `GateCommon.gmk'. Stop.
>
>  source/physics finished
> Creating shared library tmp/Linux-g++/Gate/libGate.so ...g++: error: *.o:
> No such file or directory
>
>  make: *** [tmp/Linux-g++/Gate/libGate.so] Error 1"
>
>
>
>  I don't have some .hh files or compiler can't find them. Don't know what
> is wrong. Do You have any idea?
>
>
>
>  I'll be very gratefull for Your help
>
>  Cheers
>
>  Michal
>
>
>  Pozdrawiam
> Michał Knap
>
>
>
>  2013/12/11 Hermann Fuchs <hermann.fuchs at meduniwien.ac.at>
>
>  Hello
>
> For compatibility check the official webpage.
> It should work on Scientific Linux, Ubuntu, Fedora etc...
>
> Regarding the link, I will let it be active about a week.
>
> Cheers,
> Hermann
>
>
>
> On Wed, 2013-12-11 at 14:30 +0100, Michal Knap wrote:
>
> Hello,
>
> I have one more question.
> What linux distribution is the best for this installation?
>
> Best regards,
> Michał
>
>
> Pozdrawiam
> Michał Knap
>
>
> 2013/12/11 Michal Knap <michal.knap at gmail.com>
>
> thank you
> i'll report back as soon as i finish the installation.
> whether this link will expire up to 22? I'm at work and I have no
> possibilities to download it now.
>
> Cheers
> Michał
>
> Pozdrawiam
> Michał Knap
>
>
> 2013/12/11 Hermann Fuchs <hermann.fuchs at meduniwien.ac.at>
>
> Hi Michal,
>
> try the following file. Approx 300mb, contains root, geant4, gate, ecat,
> lmf, as well as a short introduction how to install
>
> https://www.dropbox.com/s/16obqp8s67zbrde/GATE61Package.tar.gz
>
> Best regards,
> Hermann
>
>
> On Wed, 2013-12-11 at 11:03 +0100, Michal Knap wrote:
>
> Yes please.
> I will be very grateful for your help.
>
> Cheers,
> Michał
>
>
>
> 2013/12/11 Hermann Fuchs <hermann.fuchs at meduniwien.ac.at>
>
> Hello Michal,
>
> it seems the make file I sent you did not work in your case.
> If you want, I can send you a link towards the Gate6.1 archive we are
> using which works quite well.
>
> Cheers,
> Hermann
>
>
> On Mon, 2013-12-09 at 08:27 +0100, Michal Knap wrote:
>
> Hi All,
>
> I'm trying to install Gate_v6.1 on Fedora 15 32bit but I found the
> problem. When trying to compile Gate v6.1 terminal throws me the following
> message (This is only part of the message):
>
> *Making dependency for file src/GateDistributionFileMessenger.cc ...*
> *include/GateDistributionMessenger.hh:15:39: fatal error:
> GateNamedObjectMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateDoseActorMessenger.cc ...*
> *include/GateActorManager.hh:35:33: fatal error: GateMessageManager.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateBufferMessenger.cc ...*
> *include/GateBufferMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateEmCalculatorActor.cc ...*
> *include/GateVActor.hh:26:30: fatal error: GateNamedObject.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file
> src/GateBlurringWithIntrinsicResolutionMessenger.cc ...*
> *include/GateBlurringWithIntrinsicResolutionMessenger.hh:15:42: fatal
> error: GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateDistributionArrayMessenger.cc ...*
> *include/GateDistributionMessenger.hh:15:39: fatal error:
> GateNamedObjectMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePulse.cc ...*
> *include/GatePulse.hh:20:27: fatal error: GateVolumeID.hh: No such file or
> directory*
> *compilation terminated.*
> *Making dependency for file src/GateToSinoAccel.cc ...*
> *include/GatePulse.hh:20:27: fatal error: GateVolumeID.hh: No such file or
> directory*
> *compilation terminated.*
> *Making dependency for file src/GateThresholder.cc ...*
> *include/GateThresholder.hh:20:34: fatal error: GateVPulseProcessor.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePileupMessenger.cc ...*
> *include/GatePileupMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSecondaryProductionActor.cc ...*
> *include/GateVActor.hh:26:30: fatal error: GateNamedObject.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCoincidenceMultiplesKillerMessenger.cc
> ...*
> *include/GateCoincidenceMultiplesKillerMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateDigitizer.cc ...*
> *include/GateDigitizer.hh:19:33: fatal error: GateClockDependent.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCoincidenceDeadTimeMessenger.cc ...*
> *include/GateCoincidenceDeadTimeMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVImageActor.cc ...*
> *include/GateVActor.hh:26:30: fatal error: GateNamedObject.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateStopOnScriptActor.cc ...*
> *include/GateVActor.hh:26:30: fatal error: GateNamedObject.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateLocalBlurringMessenger.cc ...*
> *include/GateLocalBlurringMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCrystalHit.cc ...*
> *include/GateCrystalHit.hh:25:27: fatal error: GateVolumeID.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateOutputMgrMessenger.cc ...*
> *include/GateOutputMgrMessenger.hh:14:28: fatal error: GateMessenger.hh:
> No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCoincidenceSorter.cc ...*
> *include/GatePulse.hh:20:27: fatal error: GateVolumeID.hh: No such file or
> directory*
> *compilation terminated.*
> *Making dependency for file src/GateVActor.cc ...*
> *include/GateVActor.hh:26:30: fatal error: GateNamedObject.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateToInterfile.cc ...*
> *include/GateOutputModuleMessenger.hh:15:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateArrayComponent.cc ...*
> *include/GateArrayComponent.hh:15:31: fatal error: GateBoxComponent.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePulseAdderCompton.cc ...*
> *include/GatePulseAdderCompton.hh:26:34: fatal error:
> GateVPulseProcessor.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCoincidencePulse.cc ...*
> *include/GatePulse.hh:20:27: fatal error: GateVolumeID.hh: No such file or
> directory*
> *compilation terminated.*
> *Making dependency for file src/GateDiscretizerMessenger.cc ...*
> *include/GateDiscretizerMessenger.hh:15:42: fatal error:
> GatePulseProcessorMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVDistribution.cc ...*
> *include/GateVDistribution.hh:16:30: fatal error: GateNamedObject.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateLocalEfficiency.cc ...*
> *include/GateLocalEfficiency.hh:18:34: fatal error:
> GateVPulseProcessor.hh: No such file or directory*
> *compilation terminated.*
> *make[1]: *** No rule to make target `GateCommon.gmk'. Stop.*
>
> *source/digits_hits finished*
> *Entering source/physics ...*
>
> *GNUmakefile:16: GateCommon.gmk: No such file or directory*
> *Making dependency for file src/GateSourceVoxelInterfileReader.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePositronAnnihilationPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateGenericWrapperProcess.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVSourceMessenger.cc ...*
> *include/GateVSourceMessenger.hh:17:28: fatal error: GateMessenger.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceLinacBeam.cc ...*
> *include/GateSourceLinacBeam.hh:21:19: fatal error: TROOT.h: No such file
> or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePulseProcessorChainMessenger.cc ...*
> *include/GatePulseProcessorChainMessenger.hh:16:32: fatal error:
> GateListMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhotoElectricPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateOpticalBoundaryPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateFictitiousProcessPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVPulseProcessor.cc ...*
> *include/GateVPulseProcessor.hh:20:24: fatal error: GatePulse.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceLinacBeamMessenger.cc ...*
> *include/GateVSourceMessenger.hh:17:28: fatal error: GateMessenger.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCrossSectionsTable.cc ...*
> *src/GateCrossSectionsTable.cc:20:32: fatal error: GatePETVRTManager.hh:
> No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePulseProcessorMessenger.cc ...*
> *include/GatePulseProcessorMessenger.hh:15:42: fatal error:
> GateClockDependentMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronIonisationLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhotoElectricPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelTestReaderMessenger.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateComptonPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelRangeTranslator.cc ...*
> *include/GateSourceVoxelRangeTranslatorMessenger.hh:26:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateElectronIonisationPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatehMultipleScatteringPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateGammaConversionLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVCoincidencePulseProcessor.cc ...*
> *include/GateVCoincidencePulseProcessor.hh:20:35: fatal error:
> GateCoincidencePulse.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceMgrMessenger.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhysicsList.cc ...*
> *include/GatePhysicsList.hh:24:33: fatal error: GateMessageManager.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronicStandardProcessMessenger.cc
> ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxellizedMessenger.cc ...*
> *include/GateSourceVoxellizedMessenger.hh:22:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVSourceVoxelReaderMessenger.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateBremsstrahlungPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronIonIonisationProcessMessenger.cc
> ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateFissionPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateElectronIonisationLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTPhantomMessenger.cc ...*
> *include/GateRTPhantomMessenger.hh:5:28: fatal error: GateMessenger.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVProcess.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateScintillationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronElasticProcessPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePionMinusInelasticPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateMultiScatteringMessenger.cc ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateOpticalAbsorptionPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePETVRTSettings.cc ...*
> *src/GatePETVRTSettings.cc:15:28: fatal error: GatePhantomSD.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelInterfileReaderMessenger.cc
> ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateDecayPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelTestReader.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateeMultipleScatteringPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateFastI124.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateBremsstrahlungPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file
> src/GateSourceVoxelLinearTranslatorMessenger.cc ...*
> *include/GateSourceVoxelLinearTranslatorMessenger.hh:26:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhysicsListMessenger.cc ...*
> *include/GatePhysicsList.hh:24:33: fatal error: GateMessageManager.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePulseProcessorChain.cc ...*
> *include/GatePulseProcessorChain.hh:18:36: fatal error:
> GateModuleListManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateIonIonisationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateComptonLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelLinearTranslator.cc ...*
> *include/GateSourceVoxelLinearTranslatorMessenger.hh:26:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateUHadronElasticProcessPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateBremsstrahlungLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePositronAnnihilationStdPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateNeutronInelasticPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronIonisationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelImageReader.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePositronAnnihilationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhotoElectricLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateFictitiousFastSimulationModel.cc ...*
> *src/GateFictitiousFastSimulationModel.cc:13:37: fatal error:
> GateFictitiousVoxelMap.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateMuIonisationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelRangeTranslatorMessenger.cc
> ...*
> *include/GateSourceVoxelRangeTranslatorMessenger.hh:26:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronIonisationLowEMessenger.cc ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateMultipleScatteringPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateGammaConversionPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateBackToBack.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSingleParticleSourceMessenger.cc ...*
> *include/GateSingleParticleSourceMessenger.hh:89:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceMgr.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxellized.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRayleighLowEPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateMuBremsstrahlungPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVSource.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVProcessMessenger.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateTotalDiscreteProcess.cc ...*
> *src/GateTotalDiscreteProcess.cc:18:32: fatal error: GatePETVRTManager.hh:
> No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRadioactiveDecayPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRayleighPenelopePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTPhantomMgrMessenger.cc ...*
> *include/GateRTPhantomMgrMessenger.hh:5:28: fatal error: GateMessenger.hh:
> No such file or directory*
> *compilation terminated.*
> *Making dependency for file
> src/GateCoincidencePulseProcessorChainMessenger.cc ...*
> *include/GateCoincidencePulseProcessorChainMessenger.hh:16:32: fatal
> error: GateListMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateMuPairProductionPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePhotoElectricMessenger.cc ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTPhantomMgr.cc ...*
> *src/GateRTPhantomMgr.cc:21:37: fatal error: GateOutputMgrMessenger.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateCoincidencePulseProcessorChain.cc ...*
> *include/GateCoincidencePulseProcessorChain.hh:18:36: fatal error:
> GateModuleListManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GatePionPlusInelasticPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateVSourceVoxelReader.cc ...*
> *include/GateVSource.hh:22:34: fatal error: GateSimplifiedDecay.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateGammaConversionPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateElectronIonisationPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTVPhantomMessenger.cc ...*
> *include/GateRTVPhantomMessenger.hh:5:28: fatal error: GateMessenger.hh:
> No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateOpticalRayleighPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTPhantom.cc ...*
> *include/GateRTPhantomMessenger.hh:5:28: fatal error: GateMessenger.hh: No
> such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSingleScatteringPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateRTVPhantom.cc ...*
> *src/GateRTVPhantom.cc:2:35: fatal error: GateMaterialDatabase.hh: No such
> file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateIonInelasticPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateSourceVoxelImageReaderMessenger.cc ...*
> *include/GateVSourceVoxelReaderMessenger.hh:17:28: fatal error:
> GateMessenger.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateProtonInelasticPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateComptonPB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateHadronCapturePB.cc ...*
> *include/GateGenericWrapperProcess.hh:24:32: fatal error:
> GateFilterManager.hh: No such file or directory*
> *compilation terminated.*
> *Making dependency for file src/GateEMStandardProcessMessenger.cc ...*
> *include/GateVProcessMessenger.hh:25:35: fatal error:
> GateUIcmdWith2String.hh: No such file or directory*
> *compilation terminated.*
> *make[1]: *** No rule to make target `GateCommon.gmk'. Stop.*
>
> *source/physics finished*
> *Creating shared library tmp/Linux-g++/Gate/libGate.so ...g++: error: *.o:
> No such file or directory*
> *make: *** [tmp/Linux-g++/Gate/libGate.so] Error 1*
>
> I think I was missing some files. Where can I get it? maybe there is some
> error in GnuMakefile?
> I will be very grateful for your help.
> Michał Knap
>
> _______________________________________________
> Gate-users mailing listGate-users at lists.opengatecollaboration.orghttp://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>
>
>   --
> -------------
> DI Hermann Fuchs
> Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology
> Department of Radiation Oncology
> Medical University Vienna
> Währinger Gürtel 18-20
> A-1090 Wien
>
> Tel.  + 43 / 1 / 40 400 7271
> Mail. hermann.fuchs at meduniwien.ac.at
>
>
> _______________________________________________
> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>
>
>
>
>   --
> -------------
> DI Hermann Fuchs
> Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology
> Department of Radiation Oncology
> Medical University Vienna
> Währinger Gürtel 18-20
> A-1090 Wien
>
> Tel.  + 43 / 1 / 40 400 7271
> Mail. hermann.fuchs at meduniwien.ac.at
>
>
>
>
>
>
>   --
> -------------
> DI Hermann Fuchs
> Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology
> Department of Radiation Oncology
> Medical University Vienna
> Währinger Gürtel 18-20
> A-1090 Wien
>
> Tel.  + 43 / 1 / 40 400 7271
> Mail. hermann.fuchs at meduniwien.ac.at
>
>
>
>
>   --
> -------------
> DI Hermann Fuchs
> Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology
> Department of Radiation Oncology
> Medical University Vienna
> Währinger Gürtel 18-20
> A-1090 Wien
>
> Tel.  + 43 / 1 / 40 400 7271
> Mail. hermann.fuchs at meduniwien.ac.at
>
>
> _______________________________________________
> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>
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