[Gate-users] Error on cluster

Fernando Rannou fernando.rannou at usach.cl
Fri Nov 23 21:11:45 CET 2012


Hello Bassim

Does this happen always? With any amount of activity?
I have also found problems with ROOT, but when there is too much activity
and files grow beyond 4.8 Gbytes.

Fernando

On Fri, Nov 23, 2012 at 5:14 AM, bassim
<bassim.aklan at imp.uni-erlangen.de> wrote:
> Hallo guies,
> I have run my simulation on cluster in our institution for a cylinderical
> PET system. Gatev6.1 is installed on the culster. All works fine with root
> file as output on the cluster. But, I got now a error, when I choose root as
> an output file. The following error came out:
>  This error is symptomatic of a Tree created as a memory-resident Tree
>  Instead of doing:´
> Error in <TTree::Fill>: Failed filling branch:Hits.nPhantomRayleigh,
> nbytes=-1, entry=64320
> Error in <TTree::Fill>: Failed filling branch:Hits.nCrystalRayleigh,
> nbytes=-1, entry=64320
> Error in <TTree::Fill>: Failed filling branch:Hits.rotationAngle, nbytes=-1,
> entry=64320
> Error in <TTree::Fill>: Failed filling branch:Hits.PDGEncoding, nbytes=-1,
> entry=64328
>  This error is symptomatic of a Tree created as a memory-resident Tree
>  Instead of doing:
>     TTree *T = new TTree(...)
>     TFile *f = new TFile(...)
>  you should do:
>     TFile *f = new TFile(...)
>     TTree *T = new TTree(...)
> Error in <TTree::Fill>: Failed filling branch:Hits.stepLength, nbytes=-1,
> entry=64328
>  This error is symptomatic of a Tree created as a memory-resident Tree
>  Instead of doing:
>     TTree *T = new TTree(...)
>     TFile *f = new TFile(...)
>  you should do:
>     TFile *f = new TFile(...)
>     TTree *T = new TTree(...)
> any ideaes. Thany very much for help.
>
> Greeting,
> Bassim
>
> --
> Bassim Aklan, M.Sc.
> Institute of Medical Physics - Section for MR Imaging
> University of Erlangen-Nuremberg
> Henkestr. 91
> 91052 Erlangen, Germany
> phone: +49-(0)9131/85-25545
> Mobile phone: +49-17665299782
> bassim.aklan at imp.uni-erlangen.de
> Homepage: www.imp.uni-erlangen.de/mri
>
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