[Gate-users] getting error related to CTimage command

Shahla Razaghi shahla1988 at gmail.com
Fri Aug 17 10:01:04 CEST 2012


Dear gate user's,

I have used the following commands in order to get CT image:

/gate/output/imageCT/verbose 0
/gate/output/imageCT/enable
/gate/output/imageCT/setFileName benchmarkCT
/gate/random/setEngineName MersenneTwister
/gate/output/imageCT/setStartSeed 567489

but after executing the following messages appear and the execution process
stops:


====================================================================

#### FrameID = 0 ####

 *** Break *** segmentation violation



===========================================================
There was a crash (#7 0x00fae49d in SigHandler(ESignals) ()).
This is the entire stack trace of all threads:
===========================================================
#0  0x00d98422 in __kernel_vsyscall ()
#1  0x07a2b423 in waitpid () from /lib/tls/i686/cmov/libc.so.6
#2  0x079ccde3 in ?? () from /lib/tls/i686/cmov/libc.so.6
#3  0x026d527d in system () from /lib/tls/i686/cmov/libpthread.so.0
#4  0x00fa843d in TUnixSystem::Exec(char const*) ()
   from /home/shahla/gate6/root/lib/libCore.so
#5  0x00faf8a6 in TUnixSystem::StackTrace() ()
   from /home/shahla/gate6/root/lib/libCore.so
#6  0x00fae38f in TUnixSystem::DispatchSignals(ESignals) ()
   from /home/shahla/gate6/root/lib/libCore.so
#7  0x00fae49d in SigHandler(ESignals) ()
   from /home/shahla/gate6/root/lib/libCore.so
#8  0x00fa52a2 in sighandler(int) ()
   from /home/shahla/gate6/root/lib/libCore.so
#9  <signal handler called>
#10 0x003b3d30 in GateImageCT::Fill(unsigned int) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#11 0x00549cf0 in GateToImageCT::RecordEndOfEvent(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#12 0x0043edb6 in GateOutputMgr::RecordEndOfEvent(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#13 0x0026b067 in GateEventAction::EndOfEventAction(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#14 0x01b0b62d in G4EventManager::DoProcessing(G4Event*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4event.so
#15 0x01b0b8db in G4EventManager::ProcessOneEvent(G4Event*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4event.so
#16 0x0677129f in G4RunManager::DoEventLoop(int, char const*, int) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4run.so
#17 0x067711a1 in G4RunManager::BeamOn(int, char const*, int) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4run.so
#18 0x00283bd1 in GateApplicationMgr::StartDAQ() ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#19 0x0028ac73 in GateApplicationMgrMessenger::SetNewValue(G4UIcommand*,
G4String) () from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#20 0x031a0178 in G4UIcommand::DoIt(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#21 0x031af8b1 in G4UImanager::ApplyCommand(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#22 0x031afab6 in G4UImanager::ApplyCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#23 0x0318dded in G4UIbatch::ExecCommand(G4String const&) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#24 0x0318ecf4 in G4UIbatch::SessionStart() ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#25 0x031ad77c in G4UImanager::ExecuteMacroFile(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#26 0x031a7f3d in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String)
()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#27 0x031a0178 in G4UIcommand::DoIt(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#28 0x031af8b1 in G4UImanager::ApplyCommand(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#29 0x031afab6 in G4UImanager::ApplyCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#30 0x030feed0 in G4UIterminal::ExecuteCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4interfaces.so
#31 0x030fed53 in G4UIterminal::SessionStart() ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4interfaces.so
#32 0x08051811 in main ()
===========================================================


The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
===========================================================
#10 0x003b3d30 in GateImageCT::Fill(unsigned int) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#11 0x00549cf0 in GateToImageCT::RecordEndOfEvent(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#12 0x0043edb6 in GateOutputMgr::RecordEndOfEvent(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#13 0x0026b067 in GateEventAction::EndOfEventAction(G4Event const*) ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#14 0x01b0b62d in G4EventManager::DoProcessing(G4Event*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4event.so
#15 0x01b0b8db in G4EventManager::ProcessOneEvent(G4Event*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4event.so
#16 0x0677129f in G4RunManager::DoEventLoop(int, char const*, int) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4run.so
#17 0x067711a1 in G4RunManager::BeamOn(int, char const*, int) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4run.so
#18 0x00283bd1 in GateApplicationMgr::StartDAQ() ()
   from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#19 0x0028ac73 in GateApplicationMgrMessenger::SetNewValue(G4UIcommand*,
G4String) () from /home/shahla/gate6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
#20 0x031a0178 in G4UIcommand::DoIt(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#21 0x031af8b1 in G4UImanager::ApplyCommand(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#22 0x031afab6 in G4UImanager::ApplyCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#23 0x0318dded in G4UIbatch::ExecCommand(G4String const&) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#24 0x0318ecf4 in G4UIbatch::SessionStart() ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#25 0x031ad77c in G4UImanager::ExecuteMacroFile(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#26 0x031a7f3d in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String)
()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#27 0x031a0178 in G4UIcommand::DoIt(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#28 0x031af8b1 in G4UImanager::ApplyCommand(char const*) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#29 0x031afab6 in G4UImanager::ApplyCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4intercoms.so
#30 0x030feed0 in G4UIterminal::ExecuteCommand(G4String) ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4interfaces.so
#31 0x030fed53 in G4UIterminal::SessionStart() ()
   from /home/shahla/gate6/geant4.9.4.p02/lib/Linux-g++/libG4interfaces.so
#32 0x08051811 in main ()
===========================================================


WARNING - Attempt to delete the physical volume store while geometry closed
!
WARNING - Attempt to delete the logical volume store while geometry closed !
WARNING - Attempt to delete the solid store while geometry closed !
WARNING - Attempt to delete the region store while geometry closed !


Is there any one who have encountered such a problem previously? What's the
solution?

Thanks,
Shahla


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