[Gate-users] Trouble installing GATE

Tuan huynht4 at mcmaster.ca
Thu Feb 10 19:26:00 CET 2011


Hi,

     I. I've been trying to install GATE on a new system.  I've followed
        the instructions on the Installation Guide to the letter but I
        keep getting this error when I use make:

tuan at tuan-Inspiron-560:~/GATE_ROOT/gate_v6.0_p01$ source env_gate.sh

The current value of G4INSTALL is: /home/tuan/GATE_ROOT/geant4.9.2.p04
The current value of G4VERSION is: 9.2

Launching Geant4 configuration
script /home/tuan/GATE_ROOT/geant4.9.2.p04/env.sh

On this machine the G4SYSTEM=Linux-g++
On this machine the G4INSTALL=/home/tuan/GATE_ROOT/geant4.9.2.p04
On this machine the
G4INCLUDE=/home/tuan/GATE_ROOT/geant4.9.2.p04/include/
On this machine the G4LIB=/home/tuan/GATE_ROOT/geant4.9.2.p04/lib
On this machine the
G4LEVELGAMMADATA=/home/tuan/GATE_ROOT/geant4.9.2.p04/data/PhotonEvaporation2.0
On this machine the
G4RADIOACTIVEDATA=/home/tuan/GATE_ROOT/geant4.9.2.p04/data/RadioactiveDecay3.2
On this machine the
G4LEDATA=/home/tuan/GATE_ROOT/geant4.9.2.p04/data/G4EMLOW6.2
On this machine the
G4NEUTRONHPDATA=/home/tuan/GATE_ROOT/geant4.9.2.p04/data/G4NDL3.13
On this machine the
G4ABLADATA=/home/tuan/GATE_ROOT/geant4.9.2.p04/data/G4ABLA3.0
On this machine the CLHEP_BASE_DIR=/home/tuan/GATE_ROOT/2.0.4.2
On this machine the
CLHEP_INCLUDE_DIR=/home/tuan/GATE_ROOT/2.0.4.2/include
On this machine the CLHEP_LIB_DIR=/home/tuan/GATE_ROOT/2.0.4.2/lib
On this machine the CLHEP_LIB=CLHEP
On this machine the G4UI_USE_TCSH=1
On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1
On this machine the G4VIS_USE_OPENGLX=1
On this machine the XMFLAGS=
On this machine the XMLIBS=
On this machine the XMFLAGS=
On this machine the XAWFLAGS=
On this machine the XAWLIBS=
On this machine the G4LIB_BUILD_STATIC=1
On this machine the G4LIB_USE_GRANULAR=1

Configuring GATE options

G4WORKDIR set to .
G4TMP set to ./tmp
G4BIN set to ./bin
Data analysis and output features enabled
Ascii data output enabled
Transport and generation of optical photons is disabled
Checking your LD_LIBRARY_PATH variable...
 ==> OK: /home/tuan/GATE_ROOT/root/lib is already in your
LD_LIBRARY_PATH
Use of ROOT enabled
ROOT real-time plotter disabled
LMF data output disabled
ECAT7 data output disabled
GATEHOME is set to /home/tuan/GATE_ROOT
Checking your path variable...
 ==> OK: /home/tuan/GATE_ROOT/bin/Linux-g++ added to your path variable
Checking your LD_LIBRARY_PATH variable...
 ==> OK: /home/tuan/GATE_ROOT/tmp/Linux-g++/Gate added to your path
variable
G4VERSION9_2 is set: GATE is compatible with the geant4 version 9.2

Done

tuan at tuan-Inspiron-560:~/GATE_ROOT/gate_v6.0_p01$ make
Making dependency for file Gate.cc ...
./source/physics/include/GateSourcePhaseSpace.hh:14: fatal error:
TROOT.h: No such file or directory
compilation terminated.
Entering source/arf ...
GNUmakefile:8: *** missing separator.  Stop.
source/arf finished
Entering source/geometry ...
GNUmakefile:8: *** missing separator.  Stop.
source/geometry finished
Entering source/general ...
GNUmakefile:8: *** missing separator.  Stop.
source/general finished
Entering source/digits_hits ...
GNUmakefile:8: *** missing separator.  Stop.
source/digits_hits finished
Entering source/physics ...
GNUmakefile:8: *** missing separator.  Stop.
source/physics finished
Creating shared library tmp/Linux-g++/Gate/libGate.so ...
g++: *.o: No such file or directory
make: *** [tmp/Linux-g++/Gate/libGate.so] Error 1
tuan at tuan-Inspiron-560:~/GATE_ROOT/gate_v6.0_p01$ 

It seems like Root wasn't installed properly so I've tried reinstalling
it a few times (different versions as well) to no avail.  What could be
the problem?  

Thanks,
Tuan Huynh




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