[Gate-users] gate/physics/optical/enable not working

[Nicolas HUDIN]

Hi,

The command line:

/gate/physics/optical/enable 1

doesn't exist anymore. Now, to activate photon tracking, you have to put 
the four following lines in your physics processes:

/gate/physics/addProcess Scintillation
/gate/physics/addProcess OpticalRayleigh
/gate/physics/addProcess OpticalAbsorption
/gate/physics/addProcess OpticalBoundary

You can find them in the example_OPTICAL folder.

Kind regards,

Nicolas HUDIN

Le 30/07/2011 12:25, Tanushyam Bhattacharjee a écrit :
> I have done that,you can see that:
> tanu at tanu-Vostro1510:~/GATE/gate_v6.1$ source env_gate.sh
>
> The current value of G4INSTALL is: /home/tanu/GATE/geant4.9.4.p02
> The current value of G4VERSION is: 9.4
>
> Launching Geant4 configuration script /home/tanu/GATE/geant4.9.4.p02/env.sh
>
> On this machine the G4SYSTEM=Linux-g++
> On this machine the G4INSTALL=/home/tanu/GATE/geant4.9.4.p02
> On this machine the G4LIB=/home/tanu/GATE/geant4.9.4.p02/lib
> On this machine the
> G4LEVELGAMMADATA=/home/tanu/GATE/geant4.9.4.p02/data/PhotonEvaporation2.1
> On this machine the
> G4RADIOACTIVEDATA=/home/tanu/GATE/geant4.9.4.p02/data/RadioactiveDecay3.3
> On this machine the G4LEDATA=/home/tanu/GATE/geant4.9.4.p02/data/G4EMLOW6.19
> On this machine the
> G4NEUTRONHPDATA=/home/tanu/GATE/geant4.9.4.p02/data/G4NDL3.14
> On this machine the G4ABLADATA=/home/tanu/GATE/geant4.9.4.p02/data/G4ABLA3.0
> On this machine the
> G4REALSURFACEDATA=/home/tanu/GATE/geant4.9.4.p02/data/RealSurface1.0
> On this machine the
> G4NEUTRONXSDATA=/home/tanu/GATE/geant4.9.4.p02/data/G4NEUTRONXS1.0
> On this machine the G4PIIDATA=/home/tanu/GATE/geant4.9.4.p02/data/G4PII1.2
> On this machine the CLHEP_BASE_DIR=/home/tanu/GATE/2.1.0.1
> On this machine the CLHEP_INCLUDE_DIR=/home/tanu/GATE/2.1.0.1/include
> On this machine the CLHEP_LIB_DIR=/home/tanu/GATE/2.1.0.1/lib
> On this machine the CLHEP_LIB=CLHEP
> On this machine the G4UI_USE_TCSH=1
> On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1
> On this machine the G4VIS_BUILD_RAYTRACERX_DRIVER=1
> On this machine the G4VIS_USE_OPENGLX=1
> On this machine the G4VIS_USE_RAYTRACERX=1
> On this machine the XMFLAGS=
> On this machine the XMLIBS=
> On this machine the XMFLAGS=
> On this machine the XAWFLAGS=
> On this machine the XAWLIBS=
> On this machine the G4LIB_BUILD_SHARED=1
>
> Configuring GATE options
>
> G4WORKDIR set to .
> G4TMP set to ./tmp
> G4BIN set to ./bin
> Data analysis and output features enabled
> Ascii data output enabled
> Transport and generation of optical photons is enabled
> Checking your LD_LIBRARY_PATH variable...
>   ==>  OK: /home/tanu/GATE/root/lib is already in your LD_LIBRARY_PATH
> Use of ROOT enabled
> ROOT real-time plotter disabled
> LMF data output disabled
> ECAT7 data output disabled
> GATEHOME is set to /home/tanu/GATE/gate_v6.1/
> Checking your path variable...
>   ==>  OK: /home/tanu/GATE/gate_v6.1//bin/Linux-g++ is already in your path
> variable
> Checking your LD_LIBRARY_PATH variable...
>   ==>  OK: /home/tanu/GATE/gate_v6.1//tmp/Linux-g++/Gate is already in your
> path variable
> G4VERSION9_3 is set: GATE is compatible with the GEANT4 version 9.3 and 9.4
>
> however, when I am trying to run the command it shows:
>      [G4-cerr] ***** COMMAND NOT FOUND</gate/physics/optical/enable 1>  *****
> [Gate] Sorry, error in a macro command : abort.
> tanu at tanu-Vostro1510:~/GATE/gate_v6.1$
>
>
>
>
> On Fri, Jul 29, 2011 at 6:25 PM, Didier Benoit<benoit at imnc.in2p3.fr>  wrote:
>
>> Hi,
>>
>> In your env_gate.sh or env_gate.csh environment file you have to set your
>> 'GATE_USE_OPTICAL' variable at 1:
>>
>> export GATE_USE_OPTICAL=1
>>
>> Kind regards,
>> Didier Benoit
>>
>>
>> On 07/29/2011 02:30 PM, Tanushyam Bhattacharjee wrote:
>>
>>> Hi,
>>>
>>> I am trying to run the following in gate 6.1
>>>
>>> /gate/physics/optical/enable 1
>>>
>>> Gate gave the following error:
>>>
>>> ***** COMMAND NOT FOUND</gate/physics/optical/**enable 1>   *****
>>>
>>> Please comment. What's wrong
>>> ______________________________**_________________
>>> Gate-users mailing list
>>> Gate-users at lists.**opengatecollaboration.org<Gate-users at lists.opengatecollaboration.org>
>>> http://lists.**opengatecollaboration.org/**mailman/listinfo/gate-users<http://lists.opengatecollaboration.org/mailman/listinfo/gate-users>
>>>
>>
>> --
>> ------------------------------**------------------------------**----
>> Didier BENOIT, GATE Engineer
>> Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
>> IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
>> Campus d’Orsay
>> Bâtiment 440
>> 91406 ORSAY Cedex
>>
>> Tél : (33) 1 69 15 68 76
>> E-mail : benoit at imnc.in2p3.fr
>> http://www.imnc.in2p3.fr
>> ------------------------------**------------------------------**----
>>
>>
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