[Gate-users] [gate-users] Problem compiling Gate_v6.1
Didier Benoit
benoit at imnc.in2p3.fr
Tue Apr 19 15:42:25 CEST 2011
Hi Sadek,
GATE is not validated yet with gcc 4.5 but Geant4 yes. There the
supported and tested platform for G4:
Officially tested platforms:
* Linux, gcc-4.1.2 and gcc-4.3.2 (SLC5).
Tested on 32 and 64 bit architectures (Intel or AMD) with
Scientific Linux CERN 5 (SLC5) (based on RedHat Linux Enterprise 5).
* MacOSX 10.6 with gcc-4.2.1
* Windows/XP and CygWin Tools with: Visual C++ 9.0 (Visual Studio 2008)
More verified configurations:
* Linux, gcc-4.5.1, gcc-3.4.6 (SLC4)
* Linux, Intel-icc 11.1
Platforms configured but neither tested nor supported:
* AIX 4.3.2, xlC 6.0
* DEC V4.0, cxx C++ V6.1-027
* HP 10.20, aCC C++ B3910B A.01.23
* MacOSX 10.4, gcc-3.3
* MacOSX 10.5, gcc-4.0.1
* SGI V6.5.5, CC 7.2.1
* SUN Solaris 5.8, C++ CC-5.5.
* CLHEP 2.1.0.1
I didn't try to install GATE with gcc 4.5 or 4.6 yet.
Kind Regards,
Didier
On 19/04/2011 15:34, nehmehs at MSKCC.ORG wrote:
> Hi Gaters,
>
> I forgot in my previous email to mention that I am trying to install Gate V6.1 on Fedora Core 14 with the following configuration:
>
> -CLHEP 2.1.0.1
> -ROOT 5.28
> -G4Version 9.4.p01
> -gcc 4.5.1
>
> Could the gcc or Geant4 version be a problem?
>
> Regards,
>
> Sadek
>
>
> -----Original Message-----
> From: gate-users-bounces at lists.opengatecollaboration.org [mailto:gate-users-bounces at lists.opengatecollaboration.org] On Behalf Of irene.torres at ific.uv.es
> Sent: Tuesday, April 19, 2011 5:54 AM
> To: gate-users at lists.opengatecollaboration.org
> Subject: Re: [Gate-users] [gate-users] Problem compiling Gate_v6.1
>
> Hi Gate-users and -developers,
>
> We have installed without problems the last version of Gate (v6.1)
> using the following configuration:
>
> - CLHEP 2.1.0.1
> - ROOT 5.28
> - G4VERSION 9.4
> - gcc 4.4
>
> in Ubuntu 10.10.
>
> We are planning to install it as well in the Grid facility at our
> institution where the gcc version is 4.1 (like Abderrahman said). Is
> the problem of Abderrahman and Sadek coming from the gcc-version?
> Should I ask to update the gcc-version in the Grid to the 4.4?
>
> Thank you in advance!
>
> Best regards,
>
> Irene
>
> Quoting Didier Benoit<benoit at imnc.in2p3.fr>:
>
>> Hi Abderrahman and Sadek,
>>
>> Could you send in the mailing-list all your compilation log? Could you
>> check too if you have not another error during the compilation. I have
>> many "undefined" during the linking when I have an error during the
>> compilation.
>>
>> Kind Regards,
>> Didier Benoit
>>
>> On 18/04/2011 21:05, nehmehs at MSKCC.ORG wrote:
>>> Dear Abderrahman and Gaters,
>>>
>>> I am getting exactly the same problem and the same error messages
>>> Abderrahman is getting . let me add to Abderrahman's message that
>>> ROOT, CLHEP, and GEANT4 compile with no errors. Any advice is
>>> greatly appreciated.
>>>
>>> Regards,
>>>
>>> Sadek
>>>
>>>
>>>
>>>
>>>
>>> ________________________________________
>>> From: gate-users-bounces at lists.opengatecollaboration.org
>>> [gate-users-bounces at lists.opengatecollaboration.org] On Behalf Of
>>> abderrahman elkharrim [elkharrim at gmail.com]
>>> Sent: Monday, April 18, 2011 1:34 PM
>>> To: gate-users at lists.opengatecollaboration.org
>>> Subject: [Gate-users] [gate-users] Problem compiling Gate_v6.1
>>>
>>> Dear Gate Users;
>>>
>>> I tried to install gatev6.1. The compilation didn't work! neither with the
>>> following ingredients:
>>> - CLHEP 2.0.4.5
>>> - ROOT 5.28
>>> - lmf_v3.0
>>> - ecat_7
>>> - G4VERSION 9.3
>>> or with:
>>> - CLHEP 2.1.0.1
>>> - ROOT 5.28
>>> - lmf_v3.0
>>> - ecat_7
>>> - G4VERSION 9.4
>>> as mentioned in the readme.
>>>
>>> I used both gcc4.1 or gcc4.3
>>>
>>> In both cases the compilation goes well. After a while it stops with many "
>>> undefined" such as:
>>> . / tmp / Linux-g + + / Gate / libGate.so: undefined reference to `
>>> GateVDigiMakerModule:: ~ GateVDigiMakerModule () '
>>>
>>> What's wrong with gate v6.1?
>>>
>>> Thanks for your prompt help.
>>>
>>> Cheers,
>>>
>>> A. El Kharrim
>>> _______________________________________________
>>> Gate-users mailing list
>>> Gate-users at lists.opengatecollaboration.org
>>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>>>
>>>
>>>
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>>
>> --
>> ----------------------------------------------------------------
>> Didier BENOIT, GATE Engineer
>> Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
>> IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
>> Campus d’Orsay
>> Bâtiment 440
>> 91406 ORSAY Cedex
>>
>> Tél : (33) 1 69 15 68 76
>> E-mail : benoit at imnc.in2p3.fr
>> http://www.imnc.in2p3.fr
>> ----------------------------------------------------------------
>>
>> _______________________________________________
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>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>
>
> Irene Torres Espallardo, PhD
>
> IFIC - Instituto de Física Corpuscular
> CSIC / Universidad de Valencia
> Edificio Institutos de Investigacion
> Apartado de Correos 22085
> E-46071 Valencia
> Spain
>
> Tel.: +34 96 354 38 55
> Email: irene.torres at ific.uv.es
>
>
>
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--
----------------------------------------------------------------
Didier BENOIT, GATE Engineer
Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
Campus d’Orsay
Bâtiment 440
91406 ORSAY Cedex
Tél : (33) 1 69 15 68 76
E-mail : benoit at imnc.in2p3.fr
http://www.imnc.in2p3.fr
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