[Gate-users] OS X 10.6.3 Snow Leopard
Eunsin Lee
elee at fnal.gov
Tue Jun 1 21:33:25 CEST 2010
Hi Uwe,
This is not the case.
I got new macbook pro (core i5) with snow leopard last week.
I downloaded all other sources and built them in.
Here what I installed:
CLHEP 2.0.4.2
ROOT 5.17
GEANT 4.9.2.p03
GATE 6.0_p01
when installing geant I followed the instruction on GATE web, adding option build shared library.
Hmm...
Thanks a lot again,
Eunsin
########################################
Eunsin Lee
Doctoral Student of Physics
Texas A&M University
CDF and CMS Collaborations
elee at fnal.gov
979-845-7899
########################################
----- Original Message -----
From: Uwe Pietrzyk <u.pietrzyk at fz-juelich.de>
Date: Tuesday, June 1, 2010 3:18 pm
Subject: Re: [Gate-users] OS X 10.6.3 Snow Leopard
To: Eunsin Lee <elee at fnal.gov>
Cc: gate-users at lists.opengatecollaboration.org
> Hi Eunsin,
>
> it looks a bit that you are mixing libraries compiled and linked
> under 32 and 64 bit. In case you upgraded from a former
> Leopard 32bit system and now are running SnowLeopard,
> you need to recompile the whole bunch of programs, starting
> from CLHEP, etc. and ending with gate.
>
> Hope this comes closer to a solution.
>
> Kind regards,
>
> Uwe Pietrzyk
> -----
> On 01.06.2010, at 19:25, Eunsin Lee wrote:
>
> > Hi Uwe,
> >
> > I set as:
> > export PATH=$PATH:$GATEHOME/bin/Darwin-g++
> >
> > But still got the same errors...
> > Any other ideas?
> >
> > Thanks so much,
> > Eunsin
> >
> > ########################################
> > Eunsin Lee
> > Doctoral Student of Physics
> > Texas A&M University
> > CDF and CMS Collaborations
> > elee at fnal.gov
> > 979-845-7899
> > ########################################
> >
> > ----- Original Message -----
> > From: Uwe Pietrzyk <u.pietrzyk at fz-juelich.de>
> > Date: Tuesday, June 1, 2010 12:07 pm
> > Subject: Re: [Gate-users] OS X 10.6.3 Snow Leopard
> > To: Eunsin Lee <elee at fnal.gov>
> >
> >> Hi Eunsin,
> >>
> >> did you add something like
> >>
> >> setenv PATH "${PATH}:${GATEHOME}/bin/Darwin-g++"
> >>
> >> in your .cshrc or .bashrc, ... ?
> >>
> >> I remember that I had to add this line, otherwise the shared
> libraries
> >> were not found.
> >>
> >> Hope this helps!
> >>
> >> Kind regards,
> >>
> >> Uwe Pietrzyk
> >> -----
> >> On 01.06.2010, at 17:55, Eunsin Lee wrote:
> >>
> >>> Hi Uwe and all who kindly replied,
> >>>
> >>> At the end of installing process, the same error message showing up:
> >>>
> >>> =====
> >>> Creating shared library tmp/Darwin-g++/Gate/libGate.dylib ...
> >>> ld: warning: in GateARFDataToRoot.o, file was built for i386 which
>
> >> is not the architecture being linked (x86_64)
> >>> ld: warning: in GateARFDataToRootMessenger.o, file was built for
> >> i386 which is not the architecture being linked (x86_64)
> >>> ld: warning: in GateARFSD.o, file was built for i386 which is not
>
> >> the architecture being linked (x86_64)
> >>> ld: warning: in GateARFSDMessenger.o, file was built for i386
> which
> >> is not the architecture being linked (x86_64)
> >>> ld: warning: in GateARFTable.o, file was built for i386 which is
> not
> >> the architecture being linked (x86_64)
> >>> ld: warning: in GateARFTableMgr.o, file was built for i386 which
> is
> >> not the architecture being linked (x86_64)
> >>> ld: warning: in GateARFTableMgrMessenger.o, file was built for
> i386
> >> which is not the architecture being linked (x86_64)
> >>> .
> >>> .
> >>> .
> >>> ld: symbol(s) not found
> >>> collect2: ld returned 1 exit status
> >>> make: *** [bin/Darwin-g++/Gate] Error 1
> >>> =====
> >>> ########################################
> >>> Eunsin Lee
> >>> Post Doctoral Research Associate
> >>> PET Imaging Group
> >>> University of Pennsylvania
> >>> elee at fnal.gov
> >>> 979-574-7235
> >>> ########################################
> >>>
> >>> ----- Original Message -----
> >>> From: Uwe Pietrzyk <u.pietrzyk at fz-juelich.de>
> >>> Date: Tuesday, June 1, 2010 10:59 am
> >>> Subject: Re: [Gate-users] OS X 10.6.3 Snow Leopard
> >>> To: Eunsin Lee <elee at fnal.gov>
> >>> Cc: gate-users at lists.opengatecollaboration.org
> >>>
> >>>> Hi Eunsin,
> >>>>
> >>>> this is what I successfully use to run GATE on my MacBook Pro
> >>>> under Mac OS X (10.6.3):
> >>>>
> >>>> CLHEP 2.0.3.2
> >>>> geant4.9.2.p03
> >>>> root 5.24
> >>>> gate_v6.0_p01
> >>>>
> >>>> (I am not using lmf_v3.0)
> >>>>
> >>>> Hope this helps.
> >>>>
> >>>> Kind regards,
> >>>>
> >>>> Uwe Pietrzyk
> >>>> -----
> >>>> On 01.06.2010, at 15:36, Eunsin Lee wrote:
> >>>>
> >>>> Dear all,
> >>>>
> >>>> Has anyone ever successfully built GATE on mac OS X 10.6.3 snow leopard?
> >>>> If so what versions of geant should I install?
> >>>>
> >>>> Thanks,
> >>>> Eunsin
> >>>>
> >>>> ########################################
> >>>> Eunsin Lee
> >>>> Doctoral Student of Physics
> >>>> Texas A&M University
> >>>> CDF and CMS Collaborations
> >>>> elee at fnal.gov<
> >>>> 979-845-7899
> >>>> ########################################
> >>>> _______________________________________________
> >>>> Gate-users mailing list
> >>>> Gate-users at lists.opengatecollaboration.org
> >>>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
> >>>>
> >>>> /----------------------------------------------------------------------
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> >>>> Institut für Neurowissenschaften und Medizin / INM-1
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> >>>>
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> >>>>
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> >>
> >> /----------------------------------------------------------------------
> >> Prof. Dr. Uwe Pietrzyk
> >> Diplom-Physiker
> >> Institut für Neurowissenschaften und Medizin / INM-1
> >> Forschungszentrum Jülich GmbH
> >> 52425 Jülich
> >> Tel: +49-2461-61 4763
> >> Fax: +49-2461-61 2820 + 8229
> >> Mobil: +49-162-103-4871
> >> eMail: U.Pietrzyk at fz-juelich.de
> >> http://www.fz-juelich.de/inm
> >> &
> >> Bergische Universität Wuppertal
> >> Fachbereich C - Physik / D.08.01
> >> Gaußstr. 20
> >> 42097 Wuppertal
> >> Tel: +49-(0)202-439-3523
> >> Fax: +49-(0)202-439-2811
> >> eMail: Uwe.Pietrzyk at physik.uni-wuppertal.de
> >> http://www.medizinphysik.uni-wuppertal.de
> >> ----------------------------------------------------------------------/
> >>
> >>
> >>
> >>
> >>
> >>
> >>
>
> /----------------------------------------------------------------------
> Prof. Dr. Uwe Pietrzyk
> Diplom-Physiker
> Institut für Neurowissenschaften und Medizin / INM-1
> Forschungszentrum Jülich GmbH
> 52425 Jülich
> Tel: +49-2461-61 4763
> Fax: +49-2461-61 2820 + 8229
> Mobil: +49-162-103-4871
> eMail: U.Pietrzyk at fz-juelich.de
> http://www.fz-juelich.de/inm
> &
> Bergische Universität Wuppertal
> Fachbereich C - Physik / D.08.01
> Gaußstr. 20
> 42097 Wuppertal
> Tel: +49-(0)202-439-3523
> Fax: +49-(0)202-439-2811
> eMail: Uwe.Pietrzyk at physik.uni-wuppertal.de
> http://www.medizinphysik.uni-wuppertal.de
> ----------------------------------------------------------------------/
>
>
>
>
>
>
>
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