[Gate-users] Gate in Cluster mode

Foudray, Ange foudray1 at llnl.gov
Thu Dec 16 18:09:00 CET 2010


Hi Phil,

I have found that I get this error with the gjs job splitter and what I've found makes this error go away is by removing the following line from each of the mac files that are generated (you can go into the macro.submit file to find out where your current mac files are located):

/gate/output/root/setSaveRndmFlag 0

(which is always the third written line from the end for me).  This is a bit cumbersome, but not enough so that I've spent a lot of time trying to figure out how to automatically remove it.  Try removing this line from each generated mac file, and let me know if it works!

Ange

________________________________________
From: gate-users-bounces at lists.opengatecollaboration.org [gate-users-bounces at lists.opengatecollaboration.org] On Behalf Of Phil Sharrock [Phil.Sharrock at physics.cr.man.ac.uk]
Sent: Thursday, December 16, 2010 8:40 AM
To: gate-users at lists.opengatecollaboration.org
Subject: [Gate-users] Gate in Cluster mode

Hi,

I am running Gate with PBSpro v9.0.

I have a macro that works fine when run with gate, but when the macro is
split with gjs and the macro-name.submit from gjs is run the jobs
are submitted ok but I always get this error message:

!!! From Gate v5.0 - This command is obsolete
!!! See the new Random mechanism in the Users Guide

*** G4Exception: Aborting execution ***
/var/spool/PBS/mom_priv/jobs/288.Cluster32-00.SC: line 56: 16432 Aborted
/usr/local/GATE/Gate5/bin/Linux-g++/Gate
/home/geant/Data/.Gate/SPECTbench/SPECTbench13.mac

any body got any ideas to clear this error, as it runs fine when not
split

Phil Sharrock


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