[Gate-users] Cluster tool error: cannot find libgjs.so when running gjs

[Simon Stute]

Hi all,

The shared libraries have to be added to the LD_LIBRARY_PATH variable.
Maybe it works in the PATH variable, but it is not appropriated.

Cheers,
Simon

2009/9/17 Ida Häggström <ida.haggstrom at radfys.umu.se>

> Hi Sebnem,
> I have no idea about the cluster tools, but I experieced a similar problem
> (*./gjs: error while loading shared libraries: libgjs.so: cannot open
> shared object file: No such file or directory*) when I was running Gate,
> with a different shared object however. I think you can add the path to your
> .so-file to your PATH
>
> export PATH=<your
> path>/gate_v5.0.0/Cluster_Tools/jobsplitter/tmp/Linux-g++/gjs:$PATH
> or
> setenv PATH <your
> path>/gate_v5.0.0/Cluster_Tools/jobsplitter/tmp/Linux-g++/gjs:$PATH
>
> I'm not sure, but I think it might do the trick! Note that you have to set
> this variable every time you start a new terminal window...
> cheers!
> Ida
>
> 2009/9/16 sebnem erturk <sebnem.erturk at gmail.com>
>
>> Hi All,
>>
>> We are trying to use the Cluster_Tool package of GATE. Currently we are
>> using  version 4.0.0.
>>
>> Checking the file GNUmakefile we see this compilation options
>> DEFAULT_PLATFORM := openmosix
>> #DEFAULT_PLATFORM := condor
>> #DEFAULT_PLATFORM := openPBS
>>
>> Our aim is to run the clustered version of Gate without using any of the
>> platforms mentioned above. Is this possible or we can run Cluster tools
>> only one of  those platforms?
>>
>> Also, after compiling the jobsplitter tool and trying to execute it we got
>> the following error message:
>>
>> *./gjs: error while loading shared libraries: libgjs.so: cannot open
>> shared object file: No such file or directory*
>>
>> We tried also to move the gjs file into the bin directory of main Gate
>> executable but the result is the same. Which place that we have to put the
>> gjs executable?
>>
>> Also we noticed that the file libgjs.so is inside the /tmp folder of the
>> jobsplitter directory.
>>
>> Do we have to move it by ourself?
>>
>> Thanks for your any kind of information in advance.
>>
>> Regards,
>>
>> --
>> Sebnem Erturk
>> University of Pisa
>> Applied Physics Dpt.
>> Largo Pontecorvo
>> 56127 Pisa-Italy
>> Office :0039 050 2214346
>> Mobile :0039 345 3331440
>> http://www.df.unipi.it/~fiig/ <http://www.df.unipi.it/%7Efiig/>
>>
>> _______________________________________________
>> Gate-users mailing list
>> Gate-users at lists.healthgrid.org
>> http://lists.healthgrid.org/mailman/listinfo/gate-users
>>
>>
>
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