[Gate-users] gate5 compilation on Ubuntu problem

[Simon Stute]

Hi,

When you launch a command as sudo, your personnal environment is not
transmitted.
So give all rights to blk-desktop in your gate directory, then launch the
compilation as 'you' (without sudo), and once the compilation is successful
you can give back all rights to root.

Cheers,
Simon

On Fri, Oct 9, 2009 at 5:54 PM, Marko T. Oreskovic <mtoreskovic at yahoo.com>wrote:

> Hi all,
> I'm new to linux and having problems compiling gate5 on Ubuntu 9.04, here
> is my listing:
>
> blk at blk-desktop:/usr/share/gate/gate_v5.0.0_p01$ ls
> benchmarks     env_gate.sh  GateMaterials.db  Materials.xml
> README            Surfaces.xml
> Cluster_Tools  examples     GNUmakefile       noverbose.mac
> ReleaseNotes.pdf  variables.gmk
> env_gate.csh   Gate.cc      license           prerunGate.mac  source
> blk at blk-desktop:/usr/share/gate/gate_v5.0.0_p01$ source env_gate.sh
>
> The current value of G4INSTALL is: /usr/share/geant4/geant4.9.2.p01
> The current value of G4VERSION is: 9.2
>
> Launching Geant4 configuration script
> /usr/share/geant4/geant4.9.2.p01/env.sh
>
> On this machine the G4SYSTEM=Linux-g++
> On this machine the G4INSTALL=/usr/share/geant4/geant4.9.2.p01
> On this machine the G4LIB=/usr/share/geant4/geant4.9.2.p01/lib
> On this machine the
> G4LEVELGAMMADATA=/usr/share/geant4/geant4.9.2.p01/data/PhotonEvaporation2.0
> On this machine the
> G4RADIOACTIVEDATA=/usr/share/geant4/geant4.9.2.p01/data/RadioactiveDecay3.2
> On this machine the
> G4LEDATA=/usr/share/geant4/geant4.9.2.p01/data/G4EMLOW6.2
> On this machine the
> G4NEUTRONHPDATA=/usr/share/geant4/geant4.9.2.p01/data/G4NDL3.13
> On this machine the
> G4ABLADATA=/usr/share/geant4/geant4.9.2.p01/data/G4ABLA3.0
> On this machine the CLHEP_BASE_DIR=/usr/share/CLHEP
> On this machine the CLHEP_INCLUDE_DIR=/usr/share/CLHEP/include
> On this machine the CLHEP_LIB_DIR=/usr/share/CLHEP/lib
> On this machine the CLHEP_LIB=CLHEP
> On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1
> On this machine the G4VIS_BUILD_RAYTRACERX_DRIVER=1
> On this machine the G4VIS_USE_OPENGLX=1
> On this machine the G4VIS_USE_RAYTRACERX=1
> On this machine the XMFLAGS=
> On this machine the XMLIBS=
> On this machine the XMFLAGS=
> On this machine the XAWFLAGS=
> On this machine the XAWLIBS=
> On this machine the G4LIB_BUILD_STATIC=1
> On this machine the G4LIB_USE_GRANULAR=1
> On this machine the G4UI_USE_TCSH=1
>
> Configuring GATE options
>
> G4WORKDIR set to .
> G4TMP set to ./tmp
> G4BIN set to ./bin
> Data analysis and output features enabled
> Ascii data output enabled
> Transport and generation of optical photons is enabled
> Use of ROOT disabled
> ROOT real-time plotter disabled
> LMF data output disabled
> ECAT7 data output disabled
> GATEHOME is set to /usr/share/gate/gate_v5.0.0_p01
> Checking your path variable...
>  ==> OK: /usr/share/gate/gate_v5.0.0_p01/bin/Linux-g++ is already in your
> path variable
> G4VERSION9_2 is set: GATE is compatible with the geant4 version 9.2
>
> Done
>
> blk at blk-desktop:/usr/share/gate/gate_v5.0.0_p01$
> blk at blk-desktop:/usr/share/gate/gate_v5.0.0_p01$ sudo make
> GNUmakefile:20: /variables.gmk: No such file or directory
> GNUmakefile:22: /config/binmake.gmk: No such file or directory
> make: *** No rule to make target `/config/binmake.gmk'.  Stop.
>
>
>
> I have tried using just make, without sudo, but then I'm getting no
> permission errors.
> I have seen this problem posted before but no answers. Only one answer was
> about setting a
> date two years back, but that did not help.
> Any hints ?
>
> _______________________________________________
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> Gate-users at lists.healthgrid.org
> http://lists.healthgrid.org/mailman/listinfo/gate-users
>
>
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