[Gate-users] Link problem in compiling Gate5-p01

[Chris Reynolds]

Hi, 
I'm also have linker issues on Ubuntu. Similarly compilation is fine:

Linking Gate
./tmp/Linux-g++/Gate/libGate.a(GateOutputMgr.o): In function
`GateOutputMgr::GateOutputMgr(G4String)':
GateOutputMgr.cc:(.text+0xd13): undefined reference to
`GateARFDataToRoot::GateARFDataToRoot(G4String const&, GateOutputMgr*,
DigiMode)'
./tmp/Linux-g++/Gate/libGate.a(GateOutputMgr.o): In function
`GateOutputMgr::GateOutputMgr(G4String)':
GateOutputMgr.cc:(.text+0x12b3): undefined reference to
`GateARFDataToRoot::GateARFDataToRoot(G4String const&, GateOutputMgr*,
DigiMode)'
./tmp/Linux-g++/Gate/libGate.a(GateSteppingAction.o): In function
`GateSteppingAction::UserSteppingAction(G4Step const*)':
GateSteppingAction.cc:(.text+0x232d): undefined reference to `typeinfo
for GateARFDataToRoot'
GateSteppingAction.cc:(.text+0x23b3): undefined reference to
`GateARFDataToRoot::IncrementNbOfSourcePhotons()'
collect2: ld returned 1 exit status
make: *** [bin/Linux-g++/Gate] Error 1
 

On Wed, 2009-10-07 at 13:44 -0700, C C wrote:
> Hi, everyone, I have problems of compiling the gate5.
> the OS is Suse. It seems the compilation is not a problem. But just
> cannot link. In the screen output there are a lot of "undefinded
> reference" error. Below is part of the message. Can anybody give a
> hint what may be the problem. Thanks a lot.
> 
> Congwu
> 
> ..........
> GateMDBFieldDecoder.cc:(.text+0x1843): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> GateMDBFieldDecoder.cc:(.text+0x1857): undefined reference to
> `GateTokenizer::BreakString(G4String const&, char)'
> GateMDBFieldDecoder.cc:(.text+0x1881): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> ./tmp/Linux-g++/Gate/libGate.a(GateMDBFieldDecoder.o): In function
> `GateMDBFieldDecoder::DecodeNumericField(G4String const&, G4String,
> G4String const&, GateMap<G4String, int>&, GateMap<G4String,
> double>&)':
> GateMDBFieldDecoder.cc:(.text+0x254e): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> GateMDBFieldDecoder.cc:(.text+0x2648): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> ./tmp/Linux-g++/Gate/libGate.a(GateMDBFieldDecoder.o): In function
> `GateMDBFieldDecoder::DecodeTextField(G4String const&, G4String,
> G4String const&, GateMap<G4String, int>&)':
> GateMDBFieldDecoder.cc:(.text+0x2bce): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> GateMDBFieldDecoder.cc:(.text+0x2cc5): undefined reference to
> `GateTokenizer::CleanUpString(G4String&)'
> ./tmp/Linux-g
> ++/Gate/libGate.a(GateMDBFieldDecoder.o):GateMDBFieldDecoder.cc:(.text
> +0x2f8a): more undefined references to
> `GateTokenizer::CleanUpString(G4String&)' follow
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::~GateCompressedVoxelOutputMessenger()':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x5b): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> GateCompressedVoxelOutputMessenger.cc:(.text+0x7c): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::~GateCompressedVoxelOutputMessenger()':
> GateCompressedVoxelOutputMessenger.cc:(.text+0xd4): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::~GateCompressedVoxelOutputMessenger()':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x124): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::SetNewValue(G4UIcommand*,
> G4String)':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x31f): undefined
> reference to `GateOutputModuleMessenger::SetNewValue(G4UIcommand*,
> G4String)'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::GateCompressedVoxelOutputMessenger(GateCompressedVoxelOutput*)':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x490): undefined
> reference to
> `GateOutputModuleMessenger::GateOutputModuleMessenger(GateVOutputModule*)'
> GateCompressedVoxelOutputMessenger.cc:(.text+0x73b): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::GateCompressedVoxelOutputMessenger(GateCompressedVoxelOutput*)':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x960): undefined
> reference to
> `GateOutputModuleMessenger::GateOutputModuleMessenger(GateVOutputModule*)'
> GateCompressedVoxelOutputMessenger.cc:(.text+0xc0b): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::~GateCompressedVoxelOutputMessenger()':
> GateCompressedVoxelOutputMessenger.cc:(.text+0xc9): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):
> In function
> `GateCompressedVoxelOutputMessenger::~GateCompressedVoxelOutputMessenger()':
> GateCompressedVoxelOutputMessenger.cc:(.text+0x119): undefined
> reference to `GateOutputModuleMessenger::~GateOutputModuleMessenger()'
> ./tmp/Linux-g
> ++/Gate/libGate.a(GateCompressedVoxelOutputMessenger.o):(.rodata._ZTI34GateCompressedVoxelOutputMessenger[typeinfo for GateCompressedVoxelOutputMessenger]+0x10): undefined reference to `typeinfo for GateOutputModuleMessenger'
> ./tmp/Linux-g++/Gate/libGate.a(GateFictitiousVoxelMapInserter.o): In
> function `GateFictitiousVoxelMapInserter::AddOutput(G4String)':
> GateFictitiousVoxelMapInserter.cc:(.text+0xb36): undefined reference
> to `GateOutputMgr::instance'
> GateFictitiousVoxelMapInserter.cc:(.text+0xb48): undefined reference
> to `GateOutputMgr::instance'
> GateFictitiousVoxelMapInserter.cc:(.text+0xb54): undefined reference
> to `GateOutputMgr::m_digiMode'
> GateFictitiousVoxelMapInserter.cc:(.text+0xb86): undefined reference
> to `GateOutputMgr::AddOutputModule(GateVOutputModule*)'
> GateFictitiousVoxelMapInserter.cc:(.text+0xbfe): undefined reference
> to `GateOutputMgr::GateOutputMgr(G4String)'
> GateFictitiousVoxelMapInserter.cc:(.text+0xc05): undefined reference
> to `GateOutputMgr::instance'
> collect2: ld returned 1 exit status
> make: *** [bin/Linux-g++/Gate] Error 1
> 
> 
> 
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