[Gate-users] GATE with LMF3.0

[Liliana Caldeira]

Hello,

Thank you so much for your help.

My env_gate.sh is attached.

My env varibles:
G4BIN=./bin
CLHEP_LIB_DIR=/sotao/llcaldeira/CLHEP/lib
G4LEVELGAMMADATA=/sotao/llcaldeira/geant4.9.0.p02/data/PhotonEvaporation2.0
GATE_USE_LMF=1
SSH_AGENT_PID=26656
HOSTNAME=messias-ibeb
LMF_HOME=/sotao/llcaldeira/lmf_v3.0
G4ANALYSIS_USE_NTUPLE=1
G4INSTALL=/sotao/llcaldeira/geant4.9.0.p02
DESKTOP_STARTUP_ID=
SHELL=/bin/bash
TERM=xterm
HISTSIZE=1000
GTK_RC_FILES=/etc/gtk/gtkrc:/home/llcaldeira/.gtkrc-1.2-gnome2
G4INCLUDE=/sotao/llcaldeira/geant4.9.0.p02/include/
WINDOWID=33554505
OLDPWD=/sotao/llcaldeira
G4VERSION=9.0
G4LEDATA=/sotao/llcaldeira/geant4.9.0.p02/data/G4EMLOW5.1
USER=llcaldeira
G4ANALYSIS_USE_ROOT=1
XMFLAGS=
LD_LIBRARY_PATH=/sotao/llcaldeira/root/lib:/sotao/llcaldeira/CLHEP/lib:/sotao/ll
caldeira/gate_v3.1.2/tmp/Linux-g++/Gate::/sotao/llcaldeira/geant4.9.0.p02/lib/Li
nux-g++:/sotao/llcaldeira/CLHEP/lib
LS_COLORS=no=00:fi=00:di=00;34:ln=00;36:pi=40;33:so=00;35:bd=40;33;01:cd=40;33;0
1:or=01;05;37;41:mi=01;05;37;41:ex=00;32:*.cmd=00;32:*.exe=00;32:*.com=00;32:*.b
tm=00;32:*.bat=00;32:*.sh=00;32:*.csh=00;32:*.tar=00;31:*.tgz=00;31:*.arj=00;31:
*.taz=00;31:*.lzh=00;31:*.zip=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*
.bz=00;31:*.tz=00;31:*.rpm=00;31:*.cpio=00;31:*.jpg=00;35:*.gif=00;35:*.bmp=00;3
5:*.xbm=00;35:*.xpm=00;35:*.png=00;35:*.tif=00;35:
G4ANALYSIS_USE=1
GATEHOME=/sotao/llcaldeira/gate_v3.1.2
XMLIBS=
G4NEUTRONHPDATA=/sotao/llcaldeira/geant4.9.0.p02/data/G4NDL3.12
SSH_AUTH_SOCK=/tmp/ssh-Qsv26605/agent.26605
G4VIS_BUILD_OPENGLX_DRIVER=1
G4TMP=./tmp
G4RADIOACTIVEDATA=/sotao/llcaldeira/geant4.9.0.p02/data/RadioactiveDecay3.2
SESSION_MANAGER=local/messias-ibeb:/tmp/.ICE-unix/26605
MAIL=/var/spool/mail/llcaldeira
PATH=/sotao/llcaldeira/root/bin:/sotao/llcaldeira/gate_v3.1.2/bin/Linux-g++:/usr
/kerberos/bin:/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/llcaldeira/bin:/
home/llcaldeira/geant4/bin/Linux-g++
G4LIB=/sotao/llcaldeira/geant4.9.0.p02/lib
G4LIB_BUILD_SHARED=1
INPUTRC=/etc/inputrc
PWD=/sotao/llcaldeira/gate_v3.1.2
XMODIFIERS=@im=none
G4VERSION9=1
G4LIB_BUILD_STATIC=1
CLHEP_BASE_DIR=/sotao/llcaldeira/CLHEP
LANG=en_US.UTF-8
LAMHELPFILE=/etc/lam/lam-helpfile
GATE_USE_OPTICAL=1
GDMSESSION=Default
G4VIS_USE_OPENGLX=1
ROOTSYS=/sotao/llcaldeira/root
SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
KRB5CCNAME=FILE:/tmp/krb5cc_18582_5q1fRs
G4ANALYSIS_USE_FILE=1
G4UI_USE_TCSH=1
CLHEP_INCLUDE_DIR=/sotao/llcaldeira/CLHEP/include
HOME=/home/llcaldeira
SHLVL=2
G4SYSTEM=Linux-g++
XAWLIBS=
GNOME_DESKTOP_SESSION_ID=Default
LOGNAME=llcaldeira
G4WORKDIR=.
LESSOPEN=|/usr/bin/lesspipe.sh %s
GCONF_LOCAL_LOCKS=1
DISPLAY=:0.0
CLHEP_LIB=CLHEP
XAWFLAGS=
G_BROKEN_FILENAMES=1
COLORTERM=gnome-terminal
XAUTHORITY=/home/llcaldeira/.Xauthority
_=/usr/bin/env


On Thu, Sep 18, 2008 at 7:33 AM, Samuel BURG <samuel_burg at yahoo.fr> wrote:
> Hello,
>
> it seams that you have an error in your gate environments variables.
> Check your file (gate_env.sh) and post it here if your don't found the error.
>
> Best regards,
>
> Samuel Burg
>
>
>
> ----- Message d'origine ----
> De : Liliana Caldeira <llcaldeira at gmail.com>
> À : gate-users at lists.healthgrid.org
> Envoyé le : Mercredi, 17 Septembre 2008, 18h19mn 13s
> Objet : [Gate-users] GATE with LMF3.0
>
> Hello everyone!
>
> I'm having a strange problem with GATE. I installed GATE without LMF
> and it was working.
> After, i re-install GATE with LMF, exactly in the same directory. When
> i ran the benchmarkPET, LMF output is working.
> Until here no problem, but when i am in other directories it seems
> that GATE is still running the old version without LMF, that is, GATE
> doesn't have any command of LMF. But this version should no longer
> exist, right?
>
> I don't know what can be the problem. How can i know which GATE binary
> file is benchmarkPET running?
>
> (gate 3.1.2, root 5.14, geant4.9.0.p02 , CLHEP2.0.3.1)
>
> Thank you for your help,
> Liliana Caldeira
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>
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