[Gate-users] about gjs and gjm

[Simon Stute]

Hi,

You have just to do 'qsub macro.submit' and it's done ! The file '
macro.submit' is not a executable, it is a script that has to be submited
with the submit command of your cluster manager, in your case openmosix. You
don't have to change it to an executable, no 'chmod'.

Cheers,
Simon

2007/12/20, kam kim <kimkam007 at gmail.com>:
>
> Dear All;
>
> I am running GATE on a linux cluster. Following the Gate User's manual, I
> can use the jobsplitter to submit jobs. For instance, after using job
> splitter such as "gjs -numberofsplits 10 -clusterplatform openmosix
> macro.mac", I have 10 mac files under the directory .Gate/macro/. After
> changing macro.submit to an executable, I can run ./macro.submit under the
> current directory.
>
> Normally, it is good to run simulations in the nodes except the login
> node. This could be done by using "qsub". Could anyone please give me some
> suggestions about how to run GATE on a cluster efficiently?
>
> Thank Jan De Beenhouwer *et al. *for their paper "Cluster computing
> software for GATE simulation", Med. Phys. 34 (6), June, 2007.
>
> Best regards,
> Jonathan
>
>
> _______________________________________________
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>
>
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