[gate-users] Gate_V1.0 installation
Frederic Mayet
Frederic.Mayet at lpsc.in2p3.fr
Thu May 13 16:33:05 CEST 2004
Hi,
I think it is worth having a correct installation of G4 at cc.
I also had problems with gcc version...
Pascal, may be you can change this default version ?
Cheers
Frederic
Sebastien Jan wrote:
>
> Hi again,
>
> Concerning the release note of G4.5.2, you can find the following
> informations :
>
> 1. Supported and Tested Platforms
> ---------------------------------
>
> o SUN Solaris 5.8, C++ 5.4 Patch 111715-02.
> o Linux, gcc 2.95.2, gcc 3.2.
> This configuration was tested with the RedHat 7.3 distribution,
> versions of Geant4 have also been compiled successfully on other
> Linux distributions, like Debian or Suse.
> The default RedHat compiler gcc-2.96 distributed in RedHat 7.X
> is NOT
> supported. It has been verified that it produces incorrect
> binaries,
> therefore is not reliable. See also note below.
>
>
> This G4 version was not tested with RH 7.2.
> I have no more information or experience about this point but it is
> more reasonnable to
> try to install G4 and GATE with an other version of RedHat than the 7.2
>
> cheers
> seb
>
>
>> Hi Pascal,
>>
>> I know............
>> But I spent a lot of time trying to see what was going on and it
>> would never work!
>> I could compile G4, and then I couldn't run it. I guess the
>> executable file was probably corrupted.
>> I am sorry, I am not of much of help in this.
>>
>> Corinne
>>
>> Calvat Pascal wrote:
>>
>>> Hi Corinne,we have several version of gcc 2.95.2, 2.95.3, 3.0.4,
>>> 3.1, 3.2, 3.2.3, 3.3 ggc-alt-3.2 (version speciale du cern)egsc
>>> (2.92.66) is six years old. Normally,in the README file, the
>>> required version of gcc is 3.2 to compile gate. I don't understand
>>> why it doesn't work with gcc 3.2 on redhat 7.2.Thank you for your
>>> helpCheersPascal Calvat (CC-IN2P3)
>>>
>>> -----Message d'origine-----
>>> De : Groiselle, Corinne
>>> [mailto:gate-users-bounces at lphe1pet1.epfl.ch]De la part de
>>> Groiselle, Corinne
>>> Envoyé : jeudi 13 mai 2004 13:47
>>> À : GATE feedback and helpline for Users
>>> Objet : RE: [gate-users] Gate_V1.0 installation
>>> Hi,For info, I have never been able to have GATE running with RH
>>> 7.2 and gcc. I used egcs instead and the problem was solved!Corinne
>>>
>>> -----Original Message-----
>>> From: gate-users-bounces at lphe1pet1.epfl.ch on behalf of
>>> Calvat Pascal
>>> Sent: Thu 5/13/2004 7:40 AM
>>> To: GATE feedback and helpline for Users
>>> Cc:
>>> Subject: RE: [gate-users] Gate_V1.0 installation
>>> Hi Sebastien,1) I use the following compiler : gcc version
>>> 2.95.3 20010315 (release)Geant has been compiled with this
>>> compiler.2) Result of source env_gate:The current value of
>>> G4INSTALL is: /usr/local/geant4/geant4.5.2.ref02
>>> The current value of G4VERSION is: 5.2Launching Geant4
>>> configuration script
>>> /usr/local/geant4/geant4.5.2.ref02/env.cshOn this machine
>>> the G4SYSTEM=Linux-g++
>>> On this machine the
>>> G4INSTALL=/usr/local/geant4/geant4.5.2.ref02
>>> On this machine the
>>> G4INCLUDE=/usr/local/geant4/geant4.5.2.ref02/include
>>> On this machine the
>>> G4LIB=/usr/local/geant4/geant4.5.2.ref02/lib
>>> On this machine the
>>> G4LEVELGAMMADATA=/usr/local/geant4/geant4.5.2.ref02/data/PhotonEvaporation
>>>
>>> On this machine the
>>> G4RADIOACTIVEDATA=/usr/local/geant4/geant4.5.2.ref02/data/RadiativeDecay
>>>
>>> On this machine the
>>> G4LEDATA=/usr/local/geant4/geant4.5.2.ref02/../G4EMLOW1.1
>>> On this machine the
>>> NeutronHPCrossSections=/usr/local/geant4/geant4.5.2.ref02/../G4NDL3.7
>>>
>>> On this machine the
>>> CLHEP_BASE_DIR=/usr/local/lhcxx/CLHEP/1.8.0.0
>>> On this machine the
>>> CLHEP_INCLUDE_DIR=/usr/local/lhcxx/CLHEP/1.8.0.0/include
>>> On this machine the
>>> CLHEP_LIB_DIR=/usr/local/lhcxx/CLHEP/1.8.0.0/lib
>>> On this machine the CLHEP_LIB_DIR has been added to
>>> LD_LIBRARY_PATH
>>> On this machine the CLHEP_LIB=CLHEP
>>> On this machine the G4ANALYSIS_USE=1
>>> On this machine the G4UI_BUILD_XM_SESSION=1
>>> On this machine the G4UI_USE_XM=1
>>> On this machine the G4VIS_BUILD_DAWN_DRIVER=1
>>> On this machine the G4VIS_BUILD_OPENGLX_DRIVER=1
>>> On this machine the G4VIS_BUILD_OPENGLXM_DRIVER=1
>>> On this machine the G4VIS_USE_DAWN=1
>>> On this machine the G4VIS_USE_OPENGLX=1
>>> On this machine the G4VIS_USE_OPENGLXM=1
>>> On this machine the OGLHOME=/usr
>>> On this machine the G4LIB_BUILD_G3TOG4=1
>>> On this machine the G4USE_G3TOG4=1
>>> On this machine the G4LIB_USE_GRANULAR=1
>>> G4WORKDIR will be set to
>>> HOME=/afs/in2p3.fr/home/c/calvat.Configuring GATE
>>> optionsG4WORKDIR set to .
>>> G4TMP set to ./tmp
>>> G4BIN set to ./bin
>>> Data analysis and output features enabled
>>> Ascii data output enabled
>>> Checking your LD_LIBRARY_PATH variable...
>>> ==> OK: /usr/local/root/root_v3.10.02.gcc2.95.2/root/lib
>>> added to your LD_LIBRARY_PATH
>>> Use of ROOT enabled
>>> ROOT real-time plotter disabled
>>> LMF data output disabled
>>> ECAT7 data output disabled
>>> WARNING: variable GATEHOME is not set
>>> it will be assumed to be the current directory
>>> ==> /afs/.in2p3.fr/system/@sys/usr/local/gate
>>> Checking your path variable...
>>> ==> OK:
>>> /afs/.in2p3.fr/system/@sys/usr/local/gate/bin/Linux-g++
>>> added to your path variable
>>> G4VERSION4 is not set: GATE will use the code compatible
>>> with Geant4 version >= 5.0
>>> G4VERSION5_1 is set: GATE will use the run manager
>>> compatible with the Geant4 version >= 5.1
>>> G4VERSION5_2 is set: GATE is compatible with the Geant4
>>> version = 5.2
>>> CheersPascal Calvat
>>>
>>> -----Message d'origine-----
>>> De : gate-users-bounces at lphe1pet1.epfl.ch
>>> [mailto:gate-users-bounces at lphe1pet1.epfl.ch]De la part
>>> de Sebastien Jan
>>> Envoyé : jeudi 13 mai 2004 12:35
>>> À : GATE feedback and helpline for Users
>>> Objet : Re: [gate-users] Gate_V1.0 installation
>>> Hi Pascal,
>>>
>>> What is your compiler ?
>>>
>>> RH 7.2 et G4.5.2 are not defined in the recommanded set
>>> up, but normaly GATE works also with the following
>>> version :
>>>
>>> RH 7.2
>>> G4.5.2-p01
>>> compiler : egsc 2.91.66
>>>
>>> Cheers
>>> seb
>>>
>>>> Hi,
>>>>
>>>> I'm trying to install Gate on the CC-IN2P3 cluster with
>>>> redhat 7.2 and
>>>> geant4 (version 5.2ref02)
>>>> When I run the command "make", I obtain the following
>>>> message :
>>>>
>>>> Compiling GateAnalysis.cc ...
>>>> In file included from src/GateAnalysis.cc:85:
>>>> include/GateTrajectoryNavigator.hh:57: syntax error
>>>> before `::' token
>>>> include/GateTrajectoryNavigator.hh:69: ISO C++ forbids
>>>> declaration of
>>>> `G4std'
>>>> with no type
>>>> include/GateTrajectoryNavigator.hh:69: `G4std' declared
>>>> as an `inline' field
>>>> include/GateTrajectoryNavigator.hh:69: parse error
>>>> before `::' token
>>>> include/GateTrajectoryNavigator.hh: In member function
>>>> `G4TrajectoryContainer*
>>>> GateTrajectoryNavigator::GetTrajectoryContainer()':
>>>> include/GateTrajectoryNavigator.hh:67:
>>>> `m_trajectoryContainer' undeclared
>>>> (first use this function)
>>>> include/GateTrajectoryNavigator.hh:67: (Each undeclared
>>>> identifier is
>>>> reported
>>>> only once for each function it appears in.)
>>>> include/GateTrajectoryNavigator.hh: In function `G4int
>>>> GetPositronTrackID()':
>>>> include/GateTrajectoryNavigator.hh:71:
>>>> `m_positronTrackID' undeclared (first
>>>> use this function)
>>>> include/GateTrajectoryNavigator.hh: In function `void
>>>> SetVerboseLevel(int)':
>>>> include/GateTrajectoryNavigator.hh:75: `m_verboseLevel'
>>>> undeclared (first
>>>> use
>>>> this function)
>>>> include/GateTrajectoryNavigator.hh: At global scope:
>>>> include/GateTrajectoryNavigator.hh:77: parse error
>>>> before `protected'
>>>> include/GateTrajectoryNavigator.hh:82: syntax error
>>>> before `::' token
>>>> include/GateTrajectoryNavigator.hh:83: `G4int
>>>> m_positronTrackID' used prior
>>>> to
>>>> declaration
>>>> include/GateTrajectoryNavigator.hh:87: `G4int
>>>> m_verboseLevel' used prior to
>>>> declaration
>>>> include/GateTrajectoryNavigator.hh:88: parse error
>>>> before `}' token
>>>> In file included from include/GateVolumeID.hh:72,
>>>> from include/GateCrystalHit.hh:66,
>>>> from src/GateAnalysis.cc:92:
>>>> include/GateVObjectInserter.hh:149: syntax error before
>>>> `::' token
>>>> include/GateVObjectInserter.hh: In member function
>>>> `virtual G4int
>>>> GateVObjectInserter::GetVolumeNumber() const':
>>>> include/GateVObjectInserter.hh:119: `m_own_phys_vector'
>>>> undeclared (first
>>>> use
>>>> this function)
>>>> In file included from include/GateCrystalHit.hh:66,
>>>>
>>>> Thank you for your help.
>>>>
>>>> _________________________________________
>>>> Pascal CALVAT
>>>>
>>>> Centre de Calcul IN2P3/CNRS - Lyon (FRANCE)
>>>>
>>>> http://cc.in2p3.fr
>>>>
>>>> Tel. +33 4.72.69.41.76 | Fax. +33 4.72.69.41.70 |
>>>>
>>>> _______________________________________________
>>>> gate-users mailing list
>>>> gate-users at lphe1pet1.epfl.ch
>>>> http://lphe1pet1.epfl.ch/mailman/listinfo/gate-users
>>>>
>>>--
>>>Sebastien JAN - CEA DSV/DRM/SHFJ
>>>4 pl. Général Leclerc Tel (33) 01 69 86 78 21
>>>91406 Orsay France Fax (33) 01 69 86 77 49
>>>--
>>>
>>>
>>>
>>>------------------------------------------------------------------------
>>>
>>>_______________________________________________
>>>gate-users mailing list
>>>gate-users at lphe1pet1.epfl.ch
>>>http://lphe1pet1.epfl.ch/mailman/listinfo/gate-users
>>>
>> --
>>
>> ------------------------------------------------------------------------
>> Corinne J. Groiselle, PhD
>> Research instructor
>>
>> Division of Nuclear Medicine / Department of Radiology
>> University of Massachusetts Medical School
>> 55 Lake Avenue North
>> Worcester, MA 01655
>> USA
>>
>> phone: (508)-856-6123 - fax: (508)-856-4321
>> e-mail: Corinne.Groiselle at umassmed.edu
>> professional homepage: http://wachusett.umassmed.edu/~corinne/
>> personal homepage: http://corinne.groiselle.free.fr
>>
>>------------------------------------------------------------------------
>>_______________________________________________
>>gate-users mailing list
>>gate-users at lphe1pet1.epfl.ch
>>http://lphe1pet1.epfl.ch/mailman/listinfo/gate-users
>>
>--
>Sebastien JAN - CEA DSV/DRM/SHFJ
>4 pl. Général Leclerc Tel (33) 01 69 86 78 21
>91406 Orsay France Fax (33) 01 69 86 77 49
>--
>
>
>
>------------------------------------------------------------------------
>
>_______________________________________________
>gate-users mailing list
>gate-users at lphe1pet1.epfl.ch
>http://lphe1pet1.epfl.ch/mailman/listinfo/gate-users
>
>
--
------------------------------------------------------------------------
Frédéric MAYET
LPSC Grenoble
Laboratoire de Physique Subatomique et de Cosmologie
53, avenue des Martyrs
38026 Grenoble cedex Tel. (+33) 4 76 28 41 82
Fax. (+33) 4 76 28 40 04
Frederic.Mayet at lpsc.in2p3.fr <Mailto:Frederic.Mayet at lpsc.in2p3.fr>
http://lpsc.in2p3.fr/tep/fred <http://lpsc.in2p3.fr/tep/fred/>
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