[Gate-users] Error in voxelized phantom

[Hadi Rezaei]

Thank you for your information
What is the content of .hdr file? I converted the zubal using imageJ and
xmedcon to analyze format and .hdr and .img were created but the .hdr file
content is one line that unreadable.
Best
Hadi


On Fri, Oct 9, 2020 at 5:26 PM Xinjie Cao <xinjie.cao at stonybrook.edu> wrote:

> Hi Hadi,
>
> It looks like there is a bug when you convert the zubal raw image into
> .h33 and .i33. Try converting it into an analyze image with .hdr and .img
> extension.
>
> Best,
> Xinjie
>
> On Fri, Oct 9, 2020 at 1:06 AM Hadi Rezaei <hrezaei.m.ph at gmail.com> wrote:
>
>> Dear Gate users
>> I used xmedcon to convert zubal (.dat) phantom to interfile and the .i33
>> & .h33 files were created. The .h33 file includes 243 planes and 128*128
>> matrix size. When I import this phantom into mac file I found this message :
>> Header read from       'm002-voxel_man_dat.h33'
>> 'Data file name         'm002-voxel_man_dat.i33
>>  Nb of planes:           0
>>  Nb of pixels per plane: 128 128
>>  Pixel size:             1 1
>>  Slice thickness:        0
>>  Matrix size:            128 128
>>  Data type:
>>  Bytes per pixel:        1
>>  Data byte order:        BIGENDIAN
>>  Machine byte order:     LITTLEENDIAN
>>
>> ', assuming default BIGENDIANyte order 'LITTLEENDIAN
>>
>>
>>
>> *[G4-cerr] Error: one of the matrix dimensions is zero!  ""*
>> Did anyone face this error?
>> Any help would be appreciated.
>> Best
>> Hadi
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>> Gate-users at lists.opengatecollaboration.org
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>
>
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