[Gate-users] cluster run on GATE_v9

[Ville-Veikko Wettenhovi]

Hi,

If you simply type gjs in terminal, what do you get? You may have the gjs-package installed (https://packages.ubuntu.com/focal/gjs) that probably takes precedence over the GATE gjs in which case you need to call the GATE gjs with the full path.

Regards,
Ville-Veikko Wettenhovi
________________________________
From: Gate-users <gate-users-bounces at lists.opengatecollaboration.org> on behalf of Hadi Rezaei <hrezaei.m.ph at gmail.com>
Sent: Wednesday, July 8, 2020 14:48
To: gate-users at lists.opengatecollaboration.org <gate-users at lists.opengatecollaboration.org>
Subject: [Gate-users] cluster run on GATE_v9

Dear all
I am trying to run cluster GATE_v9 but after type "gjs -numberofsplits 5 -clusterplatform openmosix -a /media/rezaei/Data/GATE_v9/gate/Gate/benchmarks/benchPET/HADI/example1.root ROOT_FILE example.mac"   I found "Unknown option -numberofsplits"

I enter in .bashrc:
export GC_DOT_GATE_DIR=/media/rezaei/Data/GATE_v9/gate/Gate/benchmarks/benchPET/HADI
export GC_GATE_EXE_DIR=/media/rezaei/Data/GATE_v9/gate/Gate/cluster_tools/jobsplitter/gjs
and also in mac file I added the command : /gate/cluster/setTimeSplitHalflife 6586.2 s
I used this link guidance step by step:

https://opengate.readthedocs.io/en/latest/how_to_use_gate_on_a_cluster.html<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fopengate.readthedocs.io%2Fen%2Flatest%2Fhow_to_use_gate_on_a_cluster.html&data=02%7C01%7C%7Cca0c08fe95894b5f3db908d82334d88b%7C87879f2e73044bf2baf263e7f83f3c34%7C0%7C1%7C637298057177827610&sdata=wF4%2FLi5cqR25mxsxk8wUU%2Fl5x%2BlndDfzkbYGudgbHGo%3D&reserved=0>


How can I fix this problem?
any help will be highly appreciated. Thank you



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