[Gate-users] MPI job simulation GATE
Emilie Gaudin
Emilie.Odette.Gaudin at USherbrooke.ca
Fri Nov 29 15:14:59 CET 2019
Hi,
the most straightforward approach in slurm cluster is to run GATE using arrays, not MPI.
Here is an simplified example of the command you need to use/add in your bash:
#!/bin/bash
#SBATCH --account=
#SBATCH --mem-per-cpu=
#SBATCH --time= # simulation time for each array
#SBATCH --array=1-200 # number of job needed
Gate -a[outputName,output.$SLURM_ARRAY_TASK_ID] launch.mac
Here, outputAlias is an alias referring to setFileName (i.e.: /gate/output/root/setFileName {outputName})
Make sure your random seed is set to auto in your digitizer.
Regards,
Emilie
________________________________
Today's Topics:
1. MPI job simulation GATE (Deae Eddine)
Hey all
is it possible to run GATE simulation on multiprocessor for using MPI on
slurm cluster ?
Can anyone provide some more information or links inorder to run simulation
on multi processor using MPI.
Best regards
================================
Mr. Deae-eddine KRIM
Physics department
Laboratory of Physics of Matter and Radiations
Faculty of Sciences, University Mohammed First Oujda Morocco
Bvd Mohamed VI, Oujda
-------------------------------------------------------
Tel: +212 6 36866827
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