[Gate-users] Gate Installation error

Límbano Iván López Coello vancoello at gmail.com
Tue May 22 20:59:30 CEST 2018


Hello Alexandre

I have installed the version 6.12, it looks like a compatibility issue
because I am using Ubuntu 18.04, and it works using the binaries
intallation.

Thank you
Best Regards

2018-05-22 9:21 GMT-05:00 Alexandre CARRÉ <xela.errac at gmail.com>:

> Hello,
>
> Do you have install the package requirements ?
> http://wiki.opengatecollaboration.org/index.php/Package_Requirements
> https://root.cern.ch/build-prerequisites
>
> and if i remember, at this time Gate doesn't work with Geant4 10.04, you
> need to install 10.03.p3
>
> Best regards,
>
> Alexandre
>>
> 2018-05-21 15:40 GMT+02:00 Límbano Iván López Coello <vancoello at gmail.com>
> :
>
>> Hello dear Gate users
>>
>> I am getting this error after I compiled gate, I just noticed that it
>> occurs with root too. I hope you can give me some guidance in this.
>>
>> I have:
>> ubuntu 18.04
>> Root 6.10
>> Geant4 10.04.p03
>> Gate V8.1
>>
>> ERROR in cling::CIFactory::createCI(): cannot extract standard library
>> include paths!
>> Invoking:
>>   LC_ALL=C g++-5  -O2 -DNDEBUG -xc++ -E -v /dev/null 2>&1 >/dev/null |
>> awk '/^#include </,/^End of search/{if (!/^#include </ && !/^End of
>> search/){ print }}' | GREP_OPTIONS= grep -E "(c|g)\+\+"
>> Results was:
>> With exit code 256
>> input_line_1:1:10: fatal error: file '/usr/lib/gcc/x86_64-linux-gnu
>> /8.0.1/../../../../include/c++/8.0.1/new'
>>       modified since it was first processed
>> #include <new>
>>          ^
>> input_line_3:36:10: fatal error: file '/usr/lib/gcc/x86_64-linux-gnu
>> /8.0.1/../../../../include/c++/8.0.1/string'
>>       modified since it was first processed
>> #include <string>
>>          ^
>> [G4]
>> [G4] **************************************************************
>> [G4]  Geant4 version Name: geant4-10-04-patch-01    (28-February-2018)
>> [G4]                        Copyright : Geant4 Collaboration
>> [G4]                       References : NIM A 506 (2003), 250-303
>> [G4]                                  : IEEE-TNS 53 (2006), 270-278
>> [G4]                                  : NIM A 835 (2016), 186-225
>> [G4]                              WWW : http://geant4.org/
>> [G4] **************************************************************
>> [G4]
>> [Core-0] Initialization of geometry
>> [Core-0] Initialization of physics
>> [Core-0] Initialization of actors
>> [G4] Available UI session types: [ Qt, GAG, tcsh, csh ]
>> Gtk-Message: 08:36:53.172: Failed to load module "canberra-gtk-module"
>> _IceTransSocketUNIXConnect: Cannot connect to non-local host ENIAC
>> _IceTransSocketUNIXConnect: Cannot connect to non-local host ENIAC
>> Qt: Session management error: Could not open network socket
>> [Core-0]
>> [Core-0] *************************************************
>> [Core-0]  GATE version 8.1 (April 2018)
>> [Core-0]  Copyright : OpenGATE Collaboration
>> [Core-0]  Reference : Phys. Med. Biol. 49 (2004) 4543-4561
>> [Core-0]  Reference : Phys. Med. Biol. 56 (2011) 881-901
>> [Core-0]  Reference : Med. Phys. 41(6)    (2014)
>> [Core-0]  http://www.opengatecollaboration.org
>> [Core-0] *************************************************
>> [Core-0]
>> [Core-0] You are using Geant4 version 10.4.1
>>
>> Thanks in advance
>> Regards
>> Ivan
>>
>> _______________________________________________
>> Gate-users mailing list
>> Gate-users at lists.opengatecollaboration.org
>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>>
>
>
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