[Gate-users] installing gate from git

[Alex Vergara Gil]

For all those who are interest in this issue try the Eclipse IDE with
CDT plugin (Free and OpenSource) which automatically show you the
incompatibilities against c++11 as long as it can do automatic
indentation (CTRL+Shift+F) accordingly to the standard and some other
nice features such as searching for tasks, possible bugs, etc.

HTH
Alex

2015-05-26 9:52 GMT-04:00, Alex Vergara Gil <alexvergaragil at gmail.com>:
> Dear David and Andrej
>
> With the changes on pull request #21 Gate should be fully compatible
> with c++11, if not please report what is missing so I can fix it.
>
> Regards
> Alex
>
> 2015-05-26 9:12 GMT-04:00, David Sarrut
> <David.Sarrut at creatis.insa-lyon.fr>:
>> Thanks for sharing Andrej !
>>
>> indeed, Gate is still not compatible with c++11 but should be in the
>> future. Could you please fill an issue :
>> https://github.com/OpenGATE/Gate/issues so that we keep track of that ?
>>
>> thanks,
>> David
>>
>> On Fri, May 15, 2015 at 11:42 AM, Andrej Studen <Andrej.Studen at ijs.si>
>> wrote:
>>
>>>
>>> Hello!
>>>
>>> I want to share the experience of installing Gate from git on a
>>> 3.18.10-gentoo box. It basically installed out of the box with three
>>> interferences:
>>>
>>> 1.) I had to add -std=c++11 to CMAKE_CXX_FLAGS because that is how Geant
>>> and ROOT were compiled. New versions of root (ours is 6.02/05) are c++11
>>> based. In ccmake window toggle to advanced mode via [t] and add the
>>> flag,
>>> then re-configure [c] and then generate [g] before re-running make.
>>>
>>> 2.) in some files ifstream and ofstream are not prepended by std:: as
>>> they
>>> should be without a global using namespace std. I used replace, e.g.:
>>>
>>>     #> replace ofstream std::ofstream --
>>> source/physics/src/GateCrossSectionsTable.cc
>>>
>>>  My picky gcc is:
>>>
>>>     gcc version 4.9.2 (Gentoo 4.9.2 p1.3, pie-0.6.2)
>>>
>>>  replace is a part of the mysql suite.
>>>
>>> 3.) Since I used c++11 standard of c++, some CLHEP files assumed I want
>>> Thread Local Storage (TLS) enabled, which caused a mismatch between the
>>> compiled version of CLHEP (TLS disabled) and Gate portion of CLHEP (TLS
>>> enabled). To resolve, I replaced
>>>
>>> source/externals/clhep/include/CLHEP/Utility/thread_local.h
>>>
>>> with a new thread_local.h where CLHEP_THREAD_LOCAL is defined to an
>>> empty
>>> string:
>>>
>>> #define CLHEP_THREAD_LOCAL
>>>
>>> Maybe this helps someone out there.
>>>
>>> Andrej
>>> _______________________________________________
>>> Gate-users mailing list
>>> Gate-users at lists.opengatecollaboration.org
>>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>>>
>>
>>
>>
>> --
>> David Sarrut, Phd
>> Directeur de recherche CNRS
>> CREATIS, UMR CNRS 5220, Inserm U 1044
>> Centre de lutte contre le cancer Léon Bérard
>> 28 rue Laënnec, 69373 Lyon cedex 08
>> Tel : 04 78 78 51 51 / 06 74 72 05 42
>> http://www.creatis.insa-lyon.fr/~dsarrut
>> _________________________________
>>  "2 + 2 = 5,  for extremely large values of 2"
>> _________________________________
>>
>