[Gate-users] re-sizing voxels

Alex Vergara Gil alexvergaragil at gmail.com
Fri Jan 9 15:01:29 CET 2015


Hello

For what I see in your error report Gate does not support reading
"unsigned integer" from your image and that is what's happening to
you. Convert your image to signed integer, if it overloads then use
higher bit capacity such as 32 bits per pixel.

Alex

2014-12-19 13:59 GMT-05:00, Mike Tabriz <mtabriz at yahoo.com>:
> Dear Gate users, I have used ImageJ to adjust the voxel dimensions (height,
> width, thickness)of the Zubal phantom to 4 mm, and have saved the image in
> the uint16 form. I save this image as interfile using xMedcon and get the
> following error message when I read the files into GATE:   Unrecognised type
> name 'unsigned integer' Header read from 'data/voxel_man_16.h33' Data file
> name 'data/voxel_man_16.i33' Nb of planes: 0 Nb of pixels per plane: 128 128
> Pixel size: 4.000e+00 4.000e+00 Slice thickness: 4.000e+00 Matrix size:
> 5.120e+02 5.120e+02 Data type:  Data byte order: BIGENDIAN  I believe the
> image file needs to be in little-endian byte order to be read into GATE?If
> so, what is the best way to make the conversion?  Thank you,Mike
>


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