[Gate-users] *** Break *** segmentation violation for OGLIQt

신희순 msk0567 at gmail.com
Sat Mar 23 10:53:14 CET 2013


Dear gate-users

Owing to your supports, I installed GATE6.2.

I have no problem when I used  OGLSX
But....
When I start simulation with  OGLIQt, I got error message " *** Break ***
segmentation violation".
I am sending its error message.

Please advise me for it.

I checked configuration of geant4 and make install as below:

*>ccmake geant4.9.*5
CMAKE_BUILD_TYPE
Release
 CMAKE_INSTALL_PREFIX
/home/msk0567/sim2/geant4/9.5.p02_install
 GEANT4_INSTALL_DATA
ON
 GEANT4_USE_G3TOG4
OFF
 GEANT4_USE_GDML
OFF
 GEANT4_USE_INVENTOR
OFF
 GEANT4_USE_OPENGL_X11
ON
 GEANT4_USE_QT
ON
 GEANT4_USE_RAYTRACER_X11
OFF
 GEANT4_USE_SYSTEM_CLHEP
ON
 GEANT4_USE_XM
OFF
 QT_QMAKE_EXECUTABLE              /usr/bin/qmake-qt4



*>make install*
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4OpenGL.so
-- Removed runtime path from
"/home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4OpenGL.so"
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGL.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateSceneHandler.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredSceneHandler.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLBitMapStore.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLFontBaseStore.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLSceneHandler.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLSceneHandler.icc
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLViewerMessenger.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLTransform3D.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateX.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateXViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredX.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredXViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLXViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateQt.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLImmediateQtViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLQtExportDialog.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLQtMovieDialog.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLQtViewer.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredQt.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredQtSceneHandler.hh
-- Installing:
/home/msk0567/sim2/geant4/9.5.p02_install/include/Geant4/G4OpenGLStoredQtViewer.hh


Many Thanks for attentions!
Heesoon.
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[msk0567 at localhost mac]$ Gate main.mac
[G4] 
[G4] *************************************************************
[G4]  Geant4 version Name: geant4-09-05-patch-02    (22-October-2012)
[G4]                       Copyright : Geant4 Collaboration
[G4]                       Reference : NIM A 506 (2003), 250-303
[G4]                             WWW : http://cern.ch/geant4
[G4] *************************************************************
[G4] 
[Core-0] Initialization of geometry
[Core-0] Initialization of physics
[Core-0] Initialization of actors
[Core-0] 
[Core-0] **********************************************************************
[Core-0]  GATE version name: gate_v6.2                                         
[Core-0]                     Copyright : OpenGATE Collaboration                
[Core-0]                     Reference : Phys. Med. Biol. 49 (2004) 4543-4561  
[Core-0]                     Reference : Phys. Med. Biol. 56 (2011) 881-901    
[Core-0]                     WWW : http://www.opengatecollaboration.org        
[Core-0] **********************************************************************
[Core-0] 
[Core-0] Starting macro main.mac

 *** Break *** segmentation violation



===========================================================
There was a crash.
This is the entire stack trace of all threads:
===========================================================

Thread 2 (Thread 0x7f045a217700 (LWP 30600)):
#0  0x000000329d0df443 in select () from /lib64/libc.so.6
#1  0x00000032a7d370dd in ?? () from /usr/lib64/libQtCore.so.4
#2  0x00000032a7c70995 in ?? () from /usr/lib64/libQtCore.so.4
#3  0x000000329d8077e1 in start_thread () from /lib64/libpthread.so.0
#4  0x000000329d0e68ed in clone () from /lib64/libc.so.6

Thread 1 (Thread 0x7f0462698820 (LWP 30599)):
#0  0x000000329d0ab68d in waitpid () from /lib64/libc.so.6
#1  0x000000329d03e769 in do_system () from /lib64/libc.so.6
#2  0x000000329d03eaa0 in system () from /lib64/libc.so.6
#3  0x00007f0466540228 in TUnixSystem::StackTrace() () from /home/msk0567/sim2/root/5.34.05/lib/libCore.so
#4  0x00007f046653ed23 in TUnixSystem::DispatchSignals(ESignals) () from /home/msk0567/sim2/root/5.34.05/lib/libCore.so
#5  <signal handler called>
#6  0x0000000000000000 in ?? ()
#7  0x00007f046bb12778 in G4OpenGLViewer::SetView() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4OpenGL.so
#8  0x00007f046b68add0 in G4VisCommandSceneHandlerAttach::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4vis_management.so
#9  0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#10 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#11 0x00007f046b66cc76 in G4VisCommandDrawVolume::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4vis_management.so
#12 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#13 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#14 0x00007f04670e0f09 in G4UIbatch::ExecCommand(G4String const&) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#15 0x00007f04670e1e4d in G4UIbatch::SessionStart() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#16 0x00007f04670f8c33 in G4UImanager::ExecuteMacroFile(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#17 0x00007f04670f5247 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#18 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#19 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#20 0x00007f04670e0f09 in G4UIbatch::ExecCommand(G4String const&) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#21 0x00007f04670e1e4d in G4UIbatch::SessionStart() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#22 0x00007f04670f8c33 in G4UImanager::ExecuteMacroFile(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#23 0x00007f04670f5247 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#24 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#25 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#26 0x00000000004ce4c1 in main ()
===========================================================


The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
===========================================================
#6  0x0000000000000000 in ?? ()
#7  0x00007f046bb12778 in G4OpenGLViewer::SetView() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4OpenGL.so
#8  0x00007f046b68add0 in G4VisCommandSceneHandlerAttach::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4vis_management.so
#9  0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#10 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#11 0x00007f046b66cc76 in G4VisCommandDrawVolume::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4vis_management.so
#12 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#13 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#14 0x00007f04670e0f09 in G4UIbatch::ExecCommand(G4String const&) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#15 0x00007f04670e1e4d in G4UIbatch::SessionStart() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#16 0x00007f04670f8c33 in G4UImanager::ExecuteMacroFile(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#17 0x00007f04670f5247 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#18 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#19 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#20 0x00007f04670e0f09 in G4UIbatch::ExecCommand(G4String const&) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#21 0x00007f04670e1e4d in G4UIbatch::SessionStart() () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#22 0x00007f04670f8c33 in G4UImanager::ExecuteMacroFile(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#23 0x00007f04670f5247 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#24 0x00007f04670effc2 in G4UIcommand::DoIt(G4String) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#25 0x00007f04670fa8bf in G4UImanager::ApplyCommand(char const*) () from /home/msk0567/sim2/geant4/9.5.p02_install/lib64/libG4intercoms.so
#26 0x00000000004ce4c1 in main ()


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