[Gate-users] XCAT phantom

Yicheng Liang y22liang at gmail.com
Tue Feb 14 20:30:25 CET 2012


Hi gate users:

Has anyone managed to load the XCAT phantom into GATE? First I tried to 
use ImageJ to covert  raw binary image (32 bits float) to (16 bits 
unsigned integer). Then I used "xmedcon" to convert the  unsigned 
integer binary to interfile.

Here is what the error looks like:

'nrecognised type name 'signed integer
'nrecognised type name 'signed integer
  Header read from       'm000-female_atn_1.h33'
'Data file name         'm000-female_atn_1.i33
  Nb of planes:           0
  Nb of pixels per plane: 128 128
  Pixel size:             4 4
  Slice thickness:        0
  Matrix size:            512 512
  Data type:


Error: one of the matrix dimensions is zero!
Idle>
Idle>
Idle>
Idle> /gate/run/initialize
[Core-0] Initialization of geometry
ERROR - G4Box()::G4Box(): m000-female1_solid
         Dimensions too small ! - 0, 0, 0

*** G4Exception : InvalidSetup
       issued by : G4Box::G4Box()
Invalid dimensions. Too small.
*** Fatal Exception *** core dump ***

*** G4Exception: Aborting execution ***
Aborted


Thank you

Yicheng Liang
liangy26 at mcmaster.ca
MSc. Candidate
Medical Physics & Applied Radiation Science
McMaster University
Canada


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