[Gate-users] Error meanings

[Muhammad Irfan Karamat]

Hi,
I figured out the problem the problem was with the interfile header format.
The problem was solved by editing and using the interfile header file
Œphantom.h33¹  from benchSPECT folder. However, now my code is crashing with
the following stack of information. I wonder if someone can help.



*** Break *** segmentation violation



===========================================================
There was a crash.
This is the entire stack trace of all threads:
===========================================================

Thread 1 (process 36626):
#0  0x00007fff84deab28 in wait4 ()
#1  0x00007fff84dff0e6 in system ()
#2  0x0000000101cc7f7c in TUnixSystem::StackTrace ()
#3  0x0000000101cc5121 in TUnixSystem::DispatchSignals ()
#4  <signal handler called>
#5  0x00007fff88015f80 in std::_Rb_tree_increment ()
#6  0x0000000100258728 in GatePhysicsList::~GatePhysicsList ()
#7  0x00000001031b8665 in G4RunManager::~G4RunManager ()
#8  0x00000001002843c9 in GateRunManager::~GateRunManager ()
#9  0x000000010000505f in main ()
===========================================================


The lines below might hint at the cause of the crash.
If they do not help you then please submit a bug report at
http://root.cern.ch/bugs. Please post the ENTIRE stack trace
from above as an attachment in addition to anything else
that might help us fixing this issue.
===========================================================
#5  0x00007fff88015f80 in std::_Rb_tree_increment ()
#6  0x0000000100258728 in GatePhysicsList::~GatePhysicsList ()
#7  0x00000001031b8665 in G4RunManager::~G4RunManager ()
#8  0x00000001002843c9 in GateRunManager::~GateRunManager ()
#9  0x000000010000505f in main ()
===========================================================


[G4] WARNING - Attempt to delete the physical volume store while geometry
closed !
[G4] WARNING - Attempt to delete the logical volume store while geometry
closed !
[G4] WARNING - Attempt to delete the solid store while geometry closed !
[G4] WARNING - Attempt to delete the region store while geometry closed !

Thanks,


Muhammad Irfan Karamat,
PhD Student,
Medical Physics & Applied Radiation Sciences
McMaster University
HAMILTON ON   L8S 4K1
Tel:   (905) 521-2100, Ext. 73389

On 12-12-19 4:25 PM, "Muhammad Irfan Karamat" <karamami at mcmaster.ca> wrote:

> Hi,
> I am trying to read a voxelized breast phantom (Semi-ellipsoid) using
> interfile. Everything seems right to me. I need help in understanding the
> following error message.
> 
> 
> [Core-0] Initialization of geometry
>     [G4-cerr] ERROR - G4Box()::G4Box(): Phantom_solid
>     [G4-cerr]         Dimensions too small ! - 0, 0, 0
>     [G4-cerr] 
>     [G4-cerr] *** G4Exception : InvalidSetup
>     [G4-cerr]       issued by : G4Box::G4Box()
>     [G4-cerr] Invalid dimensions. Too small.
>     [G4-cerr] *** Fatal Exception *** core dump ***
>     [G4-cerr] 
>     [G4-cerr] *** G4Exception: Aborting execution ***
> 
> 
> Thanks,
> Muhammad Irfan Karamat,
> PhD Student,
> Medical Physics & Applied Radiation Sciences
> McMaster University
> HAMILTON ON   L8S 4K1
> Tel:   (905) 521-2100, Ext. 73389
> 
> 
> _______________________________________________
> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users

Muhammad Irfan Karamat,
PhD Student,
Medical Physics & Applied Radiation Sciences
McMaster University
HAMILTON ON   L8S 4K1
Tel:   (905) 521-2100, Ext. 73389

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