[Gate-users] Visualizing a source

[Gaens, Michaela]

Dear Benedikt,

I've experienced the same problem and made a quick fix some time ago, which seems to be working alright. You need to copy (and overwrite) the attached files to the gate_v6.1/source/physics/include (for the .hh) and  gate_v6.1/source/physics/src (for the .cc) folder and run another "make".

Hope this solves your problem.

Best regards,
Michaela



On 17.04.2012, at 16:08, Benedikt Rossboth wrote:

> Dear users,
>
> I tried to visualize my sources,
> using /gate/source/sourcename/visualize.
>
> GATE v6.1 finds the command, but nevertheless, breaks and crashes,
> showing the following error message:
>
> *** Break *** segmentation violation
>
> ===========================================================
> There was a crash.
> This is the entire stack trace of all threads:
> ===========================================================
> #0  0x00000039d66a594e in waitpid () from /lib64/libc.so.6
> #1  0x00000039d663e479 in do_system () from /lib64/libc.so.6
> #2  0x00000031b203d6b1 in TUnixSystem::StackTrace() ()
>   from /usr/lib64/root/libCore.so.5.28
> #3  0x00000031b203d073 in TUnixSystem::DispatchSignals(ESignals) ()
>   from /usr/lib64/root/libCore.so.5.28
> #4  <signal handler called>
> #5  0x00007fa450828566 in GateVSource::Visualize(G4String) ()
>   from /home/baensh/GATE6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
> #6  0x00007fa45082472c in
> GateVSourceMessenger::SetNewValue(G4UIcommand*, G4String) ()
> from /home/baensh/GATE6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
> #7  0x00007fa44aa75e02 in G4UIcommand::DoIt(G4String) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4intercoms.so
> #8  0x00007fa44aa8063f in G4UImanager::ApplyCommand(char const*) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4intercoms.so
> #9  0x00007fa44e69da6b in G4UIterminal::ExecuteCommand(G4String) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4interfaces.so
> #10 0x00007fa44e69f18a in G4UIterminal::SessionStart() ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4interfaces.so
> #11 0x000000000040d734 in main ()
> ===========================================================
>
>
> The lines below might hint at the cause of the crash.
> If they do not help you then please submit a bug report at
> http://root.cern.ch/bugs. Please post the ENTIRE stack trace
> from above as an attachment in addition to anything else
> that might help us fixing this issue.
> ===========================================================
> #5  0x00007fa450828566 in GateVSource::Visualize(G4String) ()
>   from /home/baensh/GATE6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
> #6  0x00007fa45082472c in
> GateVSourceMessenger::SetNewValue(G4UIcommand*, G4String) ()
> from /home/baensh/GATE6/gate_v6.1/tmp/Linux-g++/Gate/libGate.so
> #7  0x00007fa44aa75e02 in G4UIcommand::DoIt(G4String) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4intercoms.so
> #8  0x00007fa44aa8063f in G4UImanager::ApplyCommand(char const*) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4intercoms.so
> #9  0x00007fa44e69da6b in G4UIterminal::ExecuteCommand(G4String) ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4interfaces.so
> #10 0x00007fa44e69f18a in G4UIterminal::SessionStart() ()
>   from /home/baensh/GATE6/geant4.9.4.p01/lib/Linux-g
> ++/libG4interfaces.so
> #11 0x000000000040d734 in main ()
>
> I already tried the mentioned command with three different
> source-macros.
>
> Has anyone experienced the same issue, or has any information about it?
>
> best regards,
>
> --
> Benedikt Rossboth
> Bachelor Student, Biomed Eng,
> UAS Technikum Vienna
>
> _______________________________________________
> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users



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