[Gate-users] [gate-users] Problem compiling Gate_v6.1

Didier Benoit benoit at imnc.in2p3.fr
Tue Apr 19 15:44:36 CEST 2011


Irene,

GATE is validated with gcc 4.1, it's not necessary to install gcc 4.4.

Kind Regards,
Didier

On 19/04/2011 11:54, irene.torres at ific.uv.es wrote:
> Hi Gate-users and -developers,
>
> We have installed without problems the last version of Gate (v6.1) 
> using the following configuration:
>
>       - CLHEP 2.1.0.1
>       - ROOT 5.28
>       - G4VERSION 9.4
>       - gcc 4.4
>
> in Ubuntu 10.10.
>
> We are planning to install it as well in the Grid facility at our 
> institution where the gcc version is 4.1 (like Abderrahman said). Is 
> the problem of Abderrahman and Sadek coming from the gcc-version? 
> Should I ask to update the gcc-version in the Grid to the 4.4?
>
> Thank you in advance!
>
> Best regards,
>
> Irene
>
> Quoting Didier Benoit <benoit at imnc.in2p3.fr>:
>
>> Hi Abderrahman and Sadek,
>>
>> Could you send in the mailing-list all your compilation log? Could you
>> check too if you have not another error during the compilation. I have
>> many "undefined" during the linking when I have an error during the
>> compilation.
>>
>> Kind Regards,
>> Didier Benoit
>>
>> On 18/04/2011 21:05, nehmehs at MSKCC.ORG wrote:
>>> Dear Abderrahman and Gaters,
>>>
>>> I am getting exactly the same problem and the same error messages  
>>> Abderrahman is getting . let me add to Abderrahman's message that  
>>> ROOT, CLHEP, and GEANT4 compile with no errors. Any advice is  
>>> greatly appreciated.
>>>
>>> Regards,
>>>
>>> Sadek
>>>
>>>
>>>
>>>
>>>
>>> ________________________________________
>>> From: gate-users-bounces at lists.opengatecollaboration.org  
>>> [gate-users-bounces at lists.opengatecollaboration.org] On Behalf Of  
>>> abderrahman elkharrim [elkharrim at gmail.com]
>>> Sent: Monday, April 18, 2011 1:34 PM
>>> To: gate-users at lists.opengatecollaboration.org
>>> Subject: [Gate-users] [gate-users] Problem compiling Gate_v6.1
>>>
>>> Dear Gate Users;
>>>
>>> I tried to install gatev6.1. The compilation  didn't work! neither 
>>> with the
>>> following ingredients:
>>>      - CLHEP 2.0.4.5
>>>      - ROOT 5.28
>>>      - lmf_v3.0
>>>      - ecat_7
>>>      - G4VERSION 9.3
>>> or with:
>>>      - CLHEP 2.1.0.1
>>>      - ROOT 5.28
>>>      - lmf_v3.0
>>>      - ecat_7
>>>      - G4VERSION 9.4
>>> as mentioned in the readme.
>>>
>>> I used both gcc4.1 or gcc4.3
>>>
>>> In both cases the compilation goes well. After a while it stops  
>>> with many "
>>> undefined" such as:
>>> . / tmp / Linux-g + + / Gate / libGate.so: undefined reference to `
>>> GateVDigiMakerModule:: ~ GateVDigiMakerModule () '
>>>
>>> What's wrong with gate v6.1?
>>>
>>> Thanks for your prompt help.
>>>
>>> Cheers,
>>>
>>> A. El Kharrim
>>> _______________________________________________
>>> Gate-users mailing list
>>> Gate-users at lists.opengatecollaboration.org
>>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>>>
>>>
>>>
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>>
>>
>> -- 
>> ----------------------------------------------------------------
>> Didier BENOIT, GATE Engineer
>> Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
>> IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
>> Campus d’Orsay
>> Bâtiment 440
>> 91406 ORSAY Cedex
>>
>> Tél : (33) 1 69 15 68 76
>> E-mail : benoit at imnc.in2p3.fr
>> http://www.imnc.in2p3.fr
>> ----------------------------------------------------------------
>>
>> _______________________________________________
>> Gate-users mailing list
>> Gate-users at lists.opengatecollaboration.org
>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>
>
>
> Irene Torres Espallardo, PhD
>
> IFIC - Instituto de Física Corpuscular
>       CSIC / Universidad de Valencia
>       Edificio Institutos de Investigacion
>       Apartado de Correos 22085
>       E-46071 Valencia
>       Spain
>
> Tel.:     +34 96 354 38 55
> Email:   irene.torres at ific.uv.es
>
>
>
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-- 
----------------------------------------------------------------
Didier BENOIT, GATE Engineer
Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
Campus d’Orsay
Bâtiment 440
91406 ORSAY Cedex

Tél : (33) 1 69 15 68 76
E-mail : benoit at imnc.in2p3.fr
http://www.imnc.in2p3.fr
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