[Gate-users] How to read NCAT phantom

AliAsghar Parach aaparach at gmail.com
Tue Apr 19 08:05:12 CEST 2011


Hi Yanfei
you can use for example MATLAB program for changing the NCAT format from
float32 to uint 16, but before it you should changed the phantom ID to
integer then write it to uint16 format. then you can use XMedcon(Win or
Linux Format) to change the uint16 to interfile format. at the end for
constructing the header, as mentioned by Didier, use the gate example and
change your own parameters.

hope this help you.

On Tue, Apr 19, 2011 at 7:44 AM, Didier Benoit <benoit at imnc.in2p3.fr> wrote:

> Hi Yanfei,
>
> You have an example in GATE
> (gate_v6.1/examples/example_PHANTOM_SOURCE/Voxelized_Phantom_Source) where
> all it explains. You can use the *.h33 for your case. Your binary file is
> the *.i33 of the example. And you binary file must be in unsigned short
> (uint16_t) format.
>
> Kind Regards,
> Didier Benoit
>
>
> On 19/04/2011 01:45, Yanfei Mao wrote:
>
>> Hello,
>>
>> I have a problem on using 3D NCAT phantom. My NCAT phantom is in binary
>> format,
>> but GATE requires InterFile format to read in voxellized source. How can I
>> change the format? My NCAT phantom doesn't have a header file, how to
>> write a
>> header file for NCAT phantom?
>>
>> Thank you!
>> Yanfei Mao
>> _______________________________________________
>> Gate-users mailing list
>> Gate-users at lists.opengatecollaboration.org
>> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users
>>
>
>
> --
> ----------------------------------------------------------------
> Didier BENOIT, GATE Engineer
> Imagerie et Modélisation en Neurobiologie et Cancérologie (IMNC)
> IMNC – UMR 8165 CNRS – Université Paris 7 – Université Paris 11
> Campus d’Orsay
> Bâtiment 440
> 91406 ORSAY Cedex
>
> Tél : (33) 1 69 15 68 76
> E-mail : benoit at imnc.in2p3.fr
> http://www.imnc.in2p3.fr
> ----------------------------------------------------------------
>
>
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>



-- 
Ali Asghar Parach,Ph.D. student in Medical Physics,Tarbiat Modares
University,Tehran,Iran


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