[Gate-users] Gate on PC and cluster
yawen zheng
zhengyawen2408 at gmail.com
Fri Sep 10 08:58:00 CEST 2010
Dear Users,
I simulated a cylindrical PET system using cylindrical source
(back-to-back gamma) at the center of the detector for the simple
study.The cylindrical PET
was based on GE DLS PET,and with cylindrical phantom filled with
aluminium.I ran it on PC with virtualbox (ubuntu system) and cluster.
PC is 32-bit machine
while cluster is 64-bit.
Here are the results with phantom or without phantom ,on PC or on
cluster and Gate4.0 or Gate 5.0 ,you can see the results
with phantom on PC and on cluster are so different.Did anybody else
encounter this or know how to solve this problem?
phantom
Gate5.0 or Gate4.0
PC or cluster
total number
true
random
scattered
yes
5.0
PC
8641
6165
2194
282
yes
5.0
cluster
13355
9406
3632
317
yes
5.0
cluster
13355
9406
3632
317
yes
4.0
cluster
13362
9436
3634
292
yes
5.0
cluster
13355
9406
3632
317
no
5.0
cluster
13569
9860
3709
0
no
5.0
PC
13692
9996
3696
0
no
5.0
cluster
13569
9860
3709
0
here are the relevant parts of my macro:
/control/verbose 0
##############################
#######
#Choose the visualisation Parameters
#####################################
/vis/disable
#/control/execute visu.mac
# W O R L D
/gate/world/geometry/setXLength 150. cm
/gate/world/geometry/setYLength 150. cm
/gate/world/geometry/setZLength 150. cm
/control/execute camera.mac
/control/execute phantom.mac
/control/execute physics.mac
# I N I T I A L I Z E
/gate/systems/cylindricalPET/verbose 0
/gate/geometry/enableAutoUpdate
/run/initialize
/control/execute digitizer.mac
# V E R B O S I T Y
/control/verbose 0
/grdm/verbose 0
/run/verbose 0
/event/verbose 0
/tracking/verbose 0
/gate/application/verbose 0
/gate/generator/verbose 0
/gate/stacking/verbose 0
/gate/event/verbose 0
/gate/source/verbose 0
/control/execute source.mac
# O U T P U T
/gate/output/verbose 0
#/gate/output/root/disable
/gate/output/ascii/disable
#------------Root File-----------------------
/gate/output/root/setFileName dlsPET
/gate/output/root/setRootNtupleFlag 1
/gate/output/root/setRootSinglesAdderFlag 0
/gate/output/root/setRootSinglesReadoutFlag 0
/gate/output/root/setRootHitFlag 0
/gate/output/root/setRootSinglesFlag 0
/gate/output/root/setRootCoincidencesFlag 1
#------------ascii File-----------------------
/gate/output/ascii/setFileName discoveryPET
/gate/output/ascii/setOutFileSinglesAdderFlag 0
/gate/output/ascii/setOutFileSinglesReadoutFlag 0
/gate/output/ascii/setOutFileSinglesThresholderFlag 0
/gate/output/ascii/setOutFileSinglesUpholderFlag 0
/gate/output/ascii/setOutFileHitsFlag 0
/gate/output/ascii/setOutFileSinglesFlag 0
/gate/output/ascii/setOutFileCoincidencesFlag 0
# R A N D O M
# JamesRandom Ranlux64 MersenneTwister
#/gate/random/setEngineName MersenneTwister
#/gate/random/setEngineSeed default
#/gate/random/setEngineSeed auto
#/gate/random/setEngineSeed 123456789
#/gate/random/resetEngineFrom fileName
#/gate/random/verbose 1
# S T A R T
/gate/application/setTimeSlice 10000. s
/gate/application/setTimeStart 0. s
/gate/application/setTimeStop 1. s
/gate/application/startDAQ
exit
# P H A N T O M
/gate/world/daughters/name myphantom
/gate/world/daughters/insert cylinder
/gate/myphantom/setMaterial Aluminium
/gate/myphantom/vis/setColor grey
/gate/myphantom/geometry/setRmax 3.2 mm
/gate/myphantom/geometry/setRmin 1.95 mm
/gate/myphantom/geometry/setHeight 700 mm
/gate/myphantom/attachPhantomSD
S O U R C E
/gate/source/addSource twogamma
/gate/source/twogamma/setActivity 1000000. Bq
/gate/source/twogamma/setType backtoback
# Position
/gate/source/twogamma/gps/centre 0. 0. 0. cm
# particle
/gate/source/twogamma/gps/particle gamma
/gate/source/twogamma/gps/energytype Mono
/gate/source/twogamma/gps/monoenergy 511 keV
# TYPE
/gate/source/twogamma/gps/type Volume
# SHAPE
/gate/source/twogamma/gps/shape Cylinder
/gate/source/twogamma/gps/radius 1.5 mm
/gate/source/twogamma/gps/halfz 350 mm
#/gate/source/twogamma/gps/confine NULL
/gate/source/twogamma/gps/angtype iso
# EMISSION ANGLES
#/gate/source/twogamma/gps/mintheta 0. deg
#/gate/source/twogamma/gps/maxtheta 180. deg
#/gate/source/twogamma/gps/minphi 0. deg
#/gate/source/twogamma/gps/maxphi 360. deg
/gate/source/list
Thanks,
yawen
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