[Gate-users] Compilation error w/ GATE

Tue May 11 01:34:45 CEST 2010

Hi,

I am having the same problem as what Sebnem described during the
compilation of GATE in a Linux machine (Red Hat/gcc 4.1.2).  I gather that
it's likely to do w/ ROOT as all missing "T***.h" files are located under
~/GATE_ROOT/root/include; however, I'm not sure what environmental setting
is the cause as I have followed the steps described in the latest
'InstallationGuide - GATE collaborative documentation wiki' to the
letters.

My "env_gate.sh" contains following environment variables:

export GATEHOME=~/GATE_ROOT/gate_v5.0.0_p01
export G4INSTALL=~/GATE_ROOT/geant4.9.1.p03
export G4VERSION=9.1
export ROOTSYS=~/GATE_ROOT/root

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$ROOTSYS/lib:~/GATE_ROOT/2.0.3.2/lib

export PATH=$PATH:$ROOTSYS/bin:$GATEHOME/bin/$G4SYSTEM

Also, the installation of CLHEP (v2.0.3.2), Geant4 (v9.1.p03) , and ROOT
(v5.26) was successfull by all indications prior to GATE installation.

I'd greatly appreciate any suggestions any of you might have.

Cordially,

Hon

> ----------------------------------------------------------------
Dear Sebnem
it seems your problem is about Root installation,please installed
root completely and set it's environment properly.
then the problem will be solved.
hope this help you.

regards

On Sat, Mar 20, 2010 at 7:46 PM, sebnem erturk <sebnem.erturk at
gmail.com>wrote:

> Hello All,
>
> I am trying to install on my desktop:
>
> gate_v6
> root_v5.26
> CLHEP2.0.4.2
> geant_v9.1 patch2
> my gcc verison 4.1.3
>
> I am taking below messages?
>
> how should I fix the problem?
>
> Thanks for any kind of information.
>
> Regards,
>
> Sebnem
>
> [root at pbcical gate_v6.0.0]# make
> Making dependency for file Gate.cc ...
> In file included from ./source/physics/include/GateSourceMgr.hh:20,
>                 from Gate.cc:21:
> ./source/physics/include/GateSourcePhaseSpace.hh:14:19: error: TROOT.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:15:19: error: TFile.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:16:19: error: TTree.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:17:20: error: TChain.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:18:18: error: TH1D.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:19:19: error: TMath.h: No
> such file or directory
> ./source/physics/include/GateSourcePhaseSpace.hh:20:18: error: TKey.h: No
> such file or directory
> In file included from Gate.cc:33:
> ./source/digits_hits/include/GateROOTBasicOutput.hh:21:19: error: TROOT.h:
> No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:22:19: error: TFile.h:
> No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:23:17: error: TH1.h: No
> such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:24:17: error: TH2.h: No
> such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:25:22: error:
> TProfile.h: No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:26:21: error:
> TNtuple.h:
> No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:27:19: error: TTree.h:
> No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:28:21: error:
> TBranch.h:
> No such file or directory
> ./source/digits_hits/include/GateROOTBasicOutput.hh:29:21: error:
> TRandom.h:
> No such file or directory
> Gate.cc:34:28: error: TPluginManager.h: No such file or directory
> In file included from ./source/digits_hits/include/GateHitFileReader.hh:30,
>                 from Gate.cc:35:
> ./source/general/include/GateRootDefs.hh:20:19: error: TROOT.h: No such
> file
> or directory
> ./source/general/include/GateRootDefs.hh:21:19: error: TTree.h: No such
> file
> or directory
> Entering source/arf ...
> Making dependency for file src/GateARFTableMgrMessenger.cc ...
> Making dependency for file src/GateARFTableMgr.cc ...
> In file included from src/GateARFTableMgr.cc:12:
> ../arf/include/GateARFTable.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:20:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:21:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:22:21: error: TBranch.h: No such file or
> directory
> Making dependency for file src/GateARFTable.cc ...
> In file included from src/GateARFTable.cc:11:
> ../arf/include/GateARFTable.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:20:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:21:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:22:21: error: TBranch.h: No such file or
> directory
> src/GateARFTable.cc:20:19: error: TROOT.h: No such file or directory
> src/GateARFTable.cc:21:19: error: TFile.h: No such file or directory
> src/GateARFTable.cc:22:24: error: TDirectory.h: No such file or directory
> src/GateARFTable.cc:23:19: error: TTree.h: No such file or directory
> src/GateARFTable.cc:24:21: error: TBranch.h: No such file or directory
> src/GateARFTable.cc:25:18: error: TH2D.h: No such file or directory
> src/GateARFTable.cc:26:18: error: TH1D.h: No such file or directory
> src/GateARFTable.cc:30:19: error: TMath.h: No such file or directory
> Making dependency for file src/GateARFSDMessenger.cc ...
> In file included from src/GateARFSDMessenger.cc:13:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
> Making dependency for file src/GateARFSD.cc ...
> In file included from src/GateARFSD.cc:12:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
> src/GateARFSD.cc:48:18: error: TH1D.h: No such file or directory
> Making dependency for file src/GateARFDataToRootMessenger.cc ...
> In file included from ../arf/include/GateARFDataToRootMessenger.hh:17,
>                 from src/GateARFDataToRootMessenger.cc:13:
> ../arf/include/GateARFDataToRoot.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:20:17: error: TH1.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:21:17: error: TH2.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:22:17: error: TH3.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:23:21: error: TNtuple.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:24:21: error: TRandom.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:25:24: error: TDirectory.h: No such
> file
> or directory
> ../arf/include/GateARFDataToRoot.hh:26:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:27:21: error: TBranch.h: No such file
> or
> directory
> Making dependency for file src/GateARFDataToRoot.cc ...
> In file included from src/GateARFDataToRoot.cc:14:
> ../arf/include/GateARFDataToRoot.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:20:17: error: TH1.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:21:17: error: TH2.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:22:17: error: TH3.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:23:21: error: TNtuple.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:24:21: error: TRandom.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:25:24: error: TDirectory.h: No such
> file
> or directory
> ../arf/include/GateARFDataToRoot.hh:26:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:27:21: error: TBranch.h: No such file
> or
> directory
> src/GateARFDataToRoot.cc:50:19: error: TROOT.h: No such file or directory
> src/GateARFDataToRoot.cc:51:26: error: TApplication.h: No such file or
> directory
> src/GateARFDataToRoot.cc:52:22: error: TGClient.h: No such file or
> directory
> src/GateARFDataToRoot.cc:53:21: error: TCanvas.h: No such file or directory
> src/GateARFDataToRoot.cc:54:21: error: TSystem.h: No such file or directory
> src/GateARFDataToRoot.cc:55:19: error: TTree.h: No such file or directory
> src/GateARFDataToRoot.cc:56:21: error: TBranch.h: No such file or directory
> src/GateARFDataToRoot.cc:57:19: error: TFile.h: No such file or directory
> Making dependency for file src/GateARFTableMgr.cc ...
> In file included from src/GateARFTableMgr.cc:12:
> ../arf/include/GateARFTable.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:20:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:21:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:22:21: error: TBranch.h: No such file or
> directory
> Making dependency for file src/GateARFTable.cc ...
> In file included from src/GateARFTable.cc:11:
> ../arf/include/GateARFTable.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:20:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:21:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFTable.hh:22:21: error: TBranch.h: No such file or
> directory
> src/GateARFTable.cc:20:19: error: TROOT.h: No such file or directory
> src/GateARFTable.cc:21:19: error: TFile.h: No such file or directory
> src/GateARFTable.cc:22:24: error: TDirectory.h: No such file or directory
> src/GateARFTable.cc:23:19: error: TTree.h: No such file or directory
> src/GateARFTable.cc:24:21: error: TBranch.h: No such file or directory
> src/GateARFTable.cc:25:18: error: TH2D.h: No such file or directory
> src/GateARFTable.cc:26:18: error: TH1D.h: No such file or directory
> src/GateARFTable.cc:30:19: error: TMath.h: No such file or directory
> Making dependency for file src/GateARFSDMessenger.cc ...
> In file included from src/GateARFSDMessenger.cc:13:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
> Making dependency for file src/GateARFSD.cc ...
> In file included from src/GateARFSD.cc:12:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
> src/GateARFSD.cc:48:18: error: TH1D.h: No such file or directory
> Making dependency for file src/GateARFDataToRootMessenger.cc ...
> In file included from ../arf/include/GateARFDataToRootMessenger.hh:17,
>                 from src/GateARFDataToRootMessenger.cc:13:
> ../arf/include/GateARFDataToRoot.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:20:17: error: TH1.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:21:17: error: TH2.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:22:17: error: TH3.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:23:21: error: TNtuple.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:24:21: error: TRandom.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:25:24: error: TDirectory.h: No such
> file
> or directory
> ../arf/include/GateARFDataToRoot.hh:26:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:27:21: error: TBranch.h: No such file
> or
> directory
> Making dependency for file src/GateARFDataToRoot.cc ...
> In file included from src/GateARFDataToRoot.cc:14:
> ../arf/include/GateARFDataToRoot.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:20:17: error: TH1.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:21:17: error: TH2.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:22:17: error: TH3.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:23:21: error: TNtuple.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:24:21: error: TRandom.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:25:24: error: TDirectory.h: No such
> file
> or directory
> ../arf/include/GateARFDataToRoot.hh:26:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:27:21: error: TBranch.h: No such file
> or
> directory
> src/GateARFDataToRoot.cc:50:19: error: TROOT.h: No such file or directory
> src/GateARFDataToRoot.cc:51:26: error: TApplication.h: No such file or
> directory
> src/GateARFDataToRoot.cc:52:22: error: TGClient.h: No such file or
> directory
> src/GateARFDataToRoot.cc:53:21: error: TCanvas.h: No such file or directory
> src/GateARFDataToRoot.cc:54:21: error: TSystem.h: No such file or directory
> src/GateARFDataToRoot.cc:55:19: error: TTree.h: No such file or directory
> src/GateARFDataToRoot.cc:56:21: error: TBranch.h: No such file or directory
> src/GateARFDataToRoot.cc:57:19: error: TFile.h: No such file or directory
> Compiling GateARFDataToRoot.cc ...
> In file included from src/GateARFDataToRoot.cc:14:
> ../arf/include/GateARFDataToRoot.hh:18:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:19:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:20:17: error: TH1.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:21:17: error: TH2.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:22:17: error: TH3.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:23:21: error: TNtuple.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:24:21: error: TRandom.h: No such file
> or
> directory
> ../arf/include/GateARFDataToRoot.hh:25:24: error: TDirectory.h: No such
> file
> or directory
> ../arf/include/GateARFDataToRoot.hh:26:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFDataToRoot.hh:27:21: error: TBranch.h: No such file
> or
> directory
> src/GateARFDataToRoot.cc:50:19: error: TROOT.h: No such file or directory
> src/GateARFDataToRoot.cc:51:26: error: TApplication.h: No such file or
> directory
> src/GateARFDataToRoot.cc:52:22: error: TGClient.h: No such file or
> directory
> src/GateARFDataToRoot.cc:53:21: error: TCanvas.h: No such file or directory
> src/GateARFDataToRoot.cc:54:21: error: TSystem.h: No such file or directory
> src/GateARFDataToRoot.cc:55:19: error: TTree.h: No such file or directory
> src/GateARFDataToRoot.cc:56:21: error: TBranch.h: No such file or directory
> src/GateARFDataToRoot.cc:57:19: error: TFile.h: No such file or directory
> ../arf/include/GateARFDataToRoot.hh:116: error: ISO C++ forbids declaration
> of ‘TFile’ with no type
> ../arf/include/GateARFDataToRoot.hh:116: error: expected ‘;’ before ‘*’
> token
> ../arf/include/GateARFDataToRoot.hh:117: error: ISO C++ forbids declaration
> of ‘TTree’ with no type
> ../arf/include/GateARFDataToRoot.hh:117: error: expected ‘;’ before ‘*’
> token
> ../arf/include/GateARFDataToRoot.hh:118: error: ISO C++ forbids declaration
> of ‘TTree’ with no type
> ../arf/include/GateARFDataToRoot.hh:118: error: expected ‘;’ before ‘*’
> token
> ../arf/include/GateARFDataToRoot.hh:133: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:134: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:135: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:136: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:137: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:138: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:139: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:140: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:141: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:142: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:143: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh:144: error: ‘ULong64_t’ does not name a
> type
> ../arf/include/GateARFDataToRoot.hh: In member function ‘long unsigned int
> GateARFDataToRoot::GetNbOfGoingOutPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:92: error: ‘NbofGoingOutPhotons’ was
> not
> declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘long unsigned int
> GateARFDataToRoot::GetNbOfInPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:93: error: ‘NbofGoingInPhotons’ was not
> declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementGoingInPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:94: error: ‘NbofGoingInPhotons’ was not
> declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementGoingOutPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:95: error: ‘NbofGoingOutPhotons’ was
> not
> declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementKilledInsideCrystalPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:96: error:
> ‘NbofKilledInsideCrystalPhotons’ was not declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementKilledInsideColliPhotons()’:
> ../arf/include/GateARFDataToRoot.hh:97: error:
> ‘NbofKilledInsideColliPhotons’ was not declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementKilledInsideCamera()’:
> ../arf/include/GateARFDataToRoot.hh:98: error: ‘NbofKilledInsideCamera’ was
> not declared in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementInCamera()’:
> ../arf/include/GateARFDataToRoot.hh:99: error: ‘IN_camera’ was not declared
> in this scope
> ../arf/include/GateARFDataToRoot.hh: In member function ‘void
> GateARFDataToRoot::IncrementOutCamera()’:
> ../arf/include/GateARFDataToRoot.hh:100: error: ‘OUT_camera’ was not
> declared in this scope
> src/GateARFDataToRoot.cc: In constructor
> ‘GateARFDataToRoot::GateARFDataToRoot(const G4String&, GateOutputMgr*,
> DigiMode)’:
> src/GateARFDataToRoot.cc:81: error: ‘m_ARFDatafile’ was not declared in
> this
> scope
> src/GateARFDataToRoot.cc:82: error: ‘m_ARFDataTree’ was not declared in
> this
> scope
> src/GateARFDataToRoot.cc:86: error: ‘NbofGoingOutPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:87: error: ‘NbofStraightPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:88: error: ‘NbofGoingInPhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:89: error: ‘NbofKilledInsideCrystalPhotons’ was
> not
> declared in this scope
> src/GateARFDataToRoot.cc:90: error: ‘NbofKilledInsideColliPhotons’ was not
> declared in this scope
> src/GateARFDataToRoot.cc:90: error: ‘NbofKilledInsideCamera’ was not
> declared in this scope
> src/GateARFDataToRoot.cc:91: error: ‘NbOfSourcePhotons’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:92: error: ‘NbofStoredPhotons’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:94: error: ‘IN_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc:95: error: ‘OUT_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc: In member function ‘virtual void
> GateARFDataToRoot::RecordBeginOfAcquisition()’:
> src/GateARFDataToRoot.cc:122: error: ‘m_ARFDatafile’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:122: error: expected type-specifier before ‘TFile’
> src/GateARFDataToRoot.cc:122: error: expected `;' before ‘TFile’
> src/GateARFDataToRoot.cc:124: error: ‘m_ARFDataTree’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:124: error: expected type-specifier before ‘TTree’
> src/GateARFDataToRoot.cc:124: error: expected `;' before ‘TTree’
> src/GateARFDataToRoot.cc:130: error: ‘m_NbOfPhotonsTree’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:130: error: expected type-specifier before ‘TTree’
> src/GateARFDataToRoot.cc:130: error: expected `;' before ‘TTree’
> src/GateARFDataToRoot.cc:131: error: ‘NbofGoingOutPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:132: error: ‘NbofGoingInPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:133: error: ‘NbOfSourcePhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:134: error: ‘IN_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc:135: error: ‘OUT_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc:136: error: ‘NbofStoredPhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc: In member function ‘void
> GateARFDataToRoot::IncrementNbOfSourcePhotons()’:
> src/GateARFDataToRoot.cc:229: error: ‘NbOfSourcePhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc: In member function ‘void
> GateARFDataToRoot::CloseARFDataRootFile()’:
> src/GateARFDataToRoot.cc:239: error: ‘m_ARFDatafile’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:239: error: ‘m_ARFDataTree’ was not declared in
> this scope
> src/GateARFDataToRoot.cc:247: error: ‘m_NbOfPhotonsTree’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc: In member function ‘G4int
> GateARFDataToRoot::StoreARFData(GateSingleDigi*)’:
> src/GateARFDataToRoot.cc:259: error: ‘NbofStoredPhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:263: error: ‘NbOfSourcePhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:290: error: ‘m_ARFDataTree’ was not declared in
> this scope
> src/GateARFDataToRoot.cc: In member function ‘void
> GateARFDataToRoot::DisplayARFStatistics()’:
> src/GateARFDataToRoot.cc:302: error: ‘NbOfSourcePhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:303: error: ‘NbofStoredPhotons’ was not declared
> in
> this scope
> src/GateARFDataToRoot.cc:304: error: ‘OUT_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc:305: error: ‘IN_camera’ was not declared in this
> scope
> src/GateARFDataToRoot.cc:306: error: ‘NbofGoingOutPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:307: error: ‘NbofGoingInPhotons’ was not declared
> in this scope
> src/GateARFDataToRoot.cc:308: error: ‘NbofKilledInsideColliPhotons’ was not
> declared in this scope
> src/GateARFDataToRoot.cc:309: error: ‘NbofKilledInsideCamera’ was not
> declared in this scope
> src/GateARFDataToRoot.cc:310: error: ‘NbofKilledInsideCrystalPhotons’ was
> not declared in this scope
> /root/2.0.4.2/CLHEP/include/CLHEP/Units/PhysicalConstants.h: At global
> scope:
> /root/2.0.4.2/CLHEP/include/CLHEP/Units/PhysicalConstants.h:80: warning:
> ‘CLHEP::electron_charge’ defined but not used
> /root/2.0.4.2/CLHEP/include/CLHEP/Random/Randomize.h:67: warning:
> ‘CLHEP::HepRandomGenActive’ defined but not used
> make[1]: *** [../../tmp/Linux-g++/Gate/GateARFDataToRoot.o] Error 1
> source/arf finished
> Entering source/geometry ...
> Making dependency for file src/GateWedgeMessenger.cc ...
> Making dependency for file src/GateWedgeComponent.cc ...
> Making dependency for file src/GateWedge.cc ...
> Making dependency for file src/GateVVolume.cc ...
> In file included from src/GateVVolume.cc:46:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
> Making dependency for file src/GateVSystem.cc ...
> In file included from src/GateVSystem.cc:27:
> ../general/include/GateRootDefs.hh:20:19: error: TROOT.h: No such file or
> directory
> ../general/include/GateRootDefs.hh:21:19: error: TTree.h: No such file or
> directory
> Making dependency for file src/GateVoxelOutputMessenger.cc ...
> Making dependency for file src/GateVoxelOutput.cc ...
> Making dependency for file src/GateVoxelCompressorMessenger.cc ...
> Making dependency for file src/GateVoxelCompressor.cc ...
> Making dependency for file src/GateVoxelBoxParameterizedMessenger.cc ...
> Making dependency for file src/GateVoxelBoxParameterized.cc ...
> Making dependency for file src/GateVoxelBoxParameterization.cc ...
> Making dependency for file src/GateVoxelBoxParam.cc ...
> Making dependency for file src/GateVolumePlacementMessenger.cc ...
> Making dependency for file src/GateVolumePlacement.cc ...
> Making dependency for file src/GateVolumeMessenger.cc ...
> Making dependency for file src/GateVolumeManager.cc ...
> Making dependency for file src/GateVolumeID.cc ...
> Making dependency for file src/GateVisAttributesMessenger.cc ...
> Making dependency for file src/GateVImageVolumeMessenger.cc ...
> Making dependency for file src/GateVImageVolume.cc ...
> Making dependency for file src/GateVGlobalPlacement.cc ...
> Making dependency for file src/GateVGeometryVoxelTranslator.cc ...
> Making dependency for file src/GateVGeometryVoxelStoreMessenger.cc ...
> Making dependency for file src/GateVGeometryVoxelStore.cc ...
> Making dependency for file src/GateVGeometryVoxelReaderMessenger.cc ...
> Making dependency for file src/GateVGeometryVoxelReader.cc ...
> Making dependency for file src/GateTrpdMessenger.cc ...
> Making dependency for file src/GateTrpd.cc ...
> Making dependency for file src/GateTrapMessenger.cc ...
> Making dependency for file src/GateTrap.cc ...
> Making dependency for file src/GateTranslationMoveMessenger.cc ...
> Making dependency for file src/GateTranslationMove.cc ...
> Making dependency for file src/GateSystemListMessenger.cc ...
> Making dependency for file src/GateSystemListManager.cc ...
> Making dependency for file src/GateSystemComponentMessenger.cc ...
> Making dependency for file src/GateSystemComponentListMessenger.cc ...
> Making dependency for file src/GateSystemComponentList.cc ...
> Making dependency for file src/GateSystemComponent.cc ...
> Making dependency for file src/GateSurfaceMessenger.cc ...
> Making dependency for file src/GateSurfaceListMessenger.cc ...
> Making dependency for file src/GateSurfaceList.cc ...
> Making dependency for file src/GateSurface.cc ...
> Making dependency for file src/GateSphereRepeaterMessenger.cc ...
> Making dependency for file src/GateSphereRepeater.cc ...
> Making dependency for file src/GateSphereMessenger.cc ...
> Making dependency for file src/GateSphere.cc ...
> Making dependency for file src/GateSPECTHeadSystem.cc ...
> In file included from src/GateSPECTHeadSystem.cc:19:
> ../arf/include/GateARFSD.hh:17:19: error: TROOT.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:18:19: error: TFile.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:19:24: error: TDirectory.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:20:19: error: TTree.h: No such file or
> directory
> ../arf/include/GateARFSD.hh:21:21: error: TBranch.h: No such file or
> directory
>
>
> --
> Sebnem Erturk
> University of Pisa
> Applied Physics Dpt.
> Largo Pontecorvo
> 56127 Pisa-Italy
> Office :0039 050 2214346
> Mobile :0039 345 3331440
> http://www.df.unipi.it/~fiig/
> _______________________________________________
> Gate-users mailing list
> Gate-users at lists.opengatecollaboration.org
> http://lists.opengatecollaboration.org/mailman/listinfo/gate-users

-- 
**********************************
Hon Yu, Ph.D.

Research Imaging Center /
Center for Functional Onco Imaging
132 Irvine Hall
Irvine, CA 92697-5020
phone:(949)824-6001/5479
fax:(949)824-3481
email:hjyu at uci.edu
**********************************