[Gate-users] Installing GATE on Ubuntu 9.04 - linking error

Chris Reynolds C.Reynolds at westminster.ac.uk
Mon Oct 19 12:26:25 CEST 2009


Fares,
I installed root from source via the instructions on the website:

http://root.cern.ch/drupal/content/installing-root-source

(I used the svn checkout method I believe). The version is 5.25.

Hope this helps.

Chris

On Fri, 2009-10-16 at 14:42 -0700, Fares Alhassen wrote:
> Thanks for the advice, Chris. I tried making GATE again but I still received the same error message:
> 
> Using granular libraries ...
> Linking Gate
> /usr/bin/ld: skipping incompatible /home/fares/root/lib/libCore.so when searching for -lCore
> /usr/bin/ld: cannot find -lCore
> collect2: ld returned 1 exit status
> make: *** [bin/Linux-g++/Gate] Error 1
> 
> Maybe your version of ROOT is different or the way you installed ROOT is different? My ROOT version is 5.20 and I think I installed it using the binary for RedHat Linux:
> http://root.cern.ch/root/Version520.html
> 
> Sincerely,
> Fares
> 
> 
> On Fri, 16 Oct 2009 12:13:44 +0100
>  Chris Reynolds <C.Reynolds at westminster.ac.uk> wrote:
> >I had linker errors for the same platform, which were solved with a
> >simple: make clean
> >
> >before re-making: make
> >
> >sounds simple but, worked for me!
> >
> >Chris
> >
> >On Thu, 2009-10-15 at 11:43 -0700, Fares Alhassen wrote:
> >> Dear all,
> >> 
> >> Hi, I'm trying to install GATE on my Ubuntu 9.04 system. I have already installed CLHEP, geant4, and root. When I try to compile GATE, everything works fine except for a few warning messages. However, I get an error message during linking. Here's the output after the compilation is complete:
> >> 
> >> Using granular libraries ...
> >> Linking Gate
> >> /usr/bin/ld: skipping incompatible /home/fares/root/lib/libCore.so when searching for -lCore
> >> /usr/bin/ld: cannot find -lCore
> >> collect2: ld returned 1 exit status
> >> make: *** [bin/Linux-g++/Gate] Error 1
> >> 
> >> Any suggestions? Please let me know if you need more info.
> >> 
> >> Sincerely,
> >> Fares
> >> 
> >> 
> >> ------------------------------------------------
> >> Fares Alhassen
> >> Associate Specialist
> >> UCSF Physics Research Laboratory
> >> Department of Radiology and Biomedical Imaging
> >> University of California, San Francisco
> >> web: http://radiology.ucsf.edu/physics
> >> 
> >> _______________________________________________
> >> Gate-users mailing list
> >> Gate-users at lists.healthgrid.org
> >> http://lists.healthgrid.org/mailman/listinfo/gate-users
> >
> >
> >-- 
> >The University of Westminster is a charity and a company limited by
> >guarantee.  Registration number: 977818 England.  Registered Office:
> >309 Regent Street, London W1B 2UW, UK.
> 
> ------------------------------------------------
> Fares Alhassen
> Associate Specialist
> UCSF Physics Research Laboratory
> Department of Radiology and Biomedical Imaging
> University of California, San Francisco
> 185 Berry Street, Suite 350 BOX # 0946
> San Francisco, CA 94143-0946 (94107 UPS/FedEx/DHL)
> email: fares.alhassen at radiology.ucsf.edu
> T: (415) 353-9438
> F: (415) 353-9421
> web: http://radiology.ucsf.edu/physics
> 


-- 
The University of Westminster is a charity and a company limited by
guarantee.  Registration number: 977818 England.  Registered Office:
309 Regent Street, London W1B 2UW, UK.



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