[Gate-users] About TP_5 and voxelized phantom...

[Park MinJae]

Dear Gaters...

I tried to run TP_5 of Gate training in Clermont, but I got this message...

---------- 
[GateSystemListManager::CheckScannerAutoCreation:
        Creating new system based on volume inserter 'cylindricalPET'
   GateMaterialDatabase: did not load properties table for material 'GSO',
     but this need not be a problem.'
   GateMaterialDatabase: did not load properties table for material
'Vacuum',
     but this need not be a problem.'
GateVGeometryVoxelReader::GateVGeometryVoxelReader: m_voxelTranslator 0
GateVGeometryVoxelReaderMessenger::SetNewValue: newValue (translatorType) :
range

!!! GateMDBFile::LookForElementIndbStream:
        I could not find any section [Materials] in the material database
file.
        You should check the database file.
        Computation aborted!!!
----------

What should I have to do?


and I tried to use Zubal phantom, but I got this error...
----------
 Range Translator
        Range   0 : imageValue in [    0.000e+00 , 0.000e+00 ]  --->
material Air, visibility 0, coulour (0.000e+00,0.00
0e+00,0.000e+00,2.000e-01)
        Range   1 : imageValue in [    4.000e+00 , 4.000e+00 ]  --->
material Water, visibility 1, coulour (0.000e+00,0.
000e+00,1.000e+00,2.000e-01)
        Range   2 : imageValue in [    5.000e+00 , 5.000e+00 ]  --->
material Water, visibility 1, coulour (0.000e+00,0.
000e+00,1.000e+00,2.000e-01)
        Range   3 : imageValue in [    1.400e+01 , 1.500e+01 ]  --->
material Water, visibility 1, coulour (0.000e+00,0.
000e+00,1.000e+00,2.000e-01)
'nrecognised type name 'unsigned integer
 Header read from       'zubal.h33'
'Data file name         'zubal.i33
 Nb of planes:           128
 Nb of pixels per plane: 256 256
 Pixel size:             1.100e+00 1.100e+00
 Slice thickness:        1.273e+00
 Matrix size:            2.816e+02 2.816e+02
 Data type:


'!ror: Could not open header file 'zubal.i33
ERROR - G4Box()::G4Box(): zubal_brain_S
        Dimensions too small ! - 0, 0, 0

*** G4Exception : InvalidSetup
      issued by : G4Box::G4Box()
Invalid dimensions. Too small.
*** Fatal Exception *** core dump ***
----------
I converted Zubal phantom into interfile format via Xmedcon...
Any little comment will be helpful for me...:)

FYI, following is my macro code related with voxelized phantom...
----------
/gate/world/daughters/name zubal_brain
/gate/world/daughters/insert parameterizedBoxMatrix
/gate/zubal_brain/geometry/insertReader interfile
/gate/zubal_brain/interfileReader/insertTranslator range
/gate/zubal_brain/interfileReader/rangeTranslator/readTable
range_atten_brain.dat
/gate/zubal_brain/interfileReader/rangeTranslator/describe 1
/gate/zubal_brain/interfileReader/readFile zubal.h33
/gate/zubal_brain/placement/setTranslation  0. 0. 0. mm
/gate/zubal_brain/placement/setRotationAxis 1 0 0
/gate/zubal_brain/placement/setRotationAngle 0 deg
/gate/zubal_brain/attachVoxelPhantomSD
------------

MJ
 
//=================================================
//  Park MinJae
//  SNU BME Ph.D. Candidate
//
//  DialTo:+82-17-711-7809
//  MailTo:MJ at ToTi.us
//
//  Make the Dream True...
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