[gate-users] Error when using voxelized phantoms
Jose L. Rubio
jlrubio at die.upm.es
Mon Apr 11 21:56:08 CEST 2005
Hello,
I am trying to run a simulation based on one of the examples distributed
with GATE, the one in the directory
"examples/example_PHAMTOM_SOURCE/Voxelized_Phantom_Source", and I get
the following error when the simulation starts:
********************************************************************************
* G4Track Information: Particle = gamma, Track ID = 2, Parent
ID = 0
********************************************************************************
Step# X(mm) Y(mm) Z(mm) KinE(MeV) dE(MeV) StepLeng
TrackLeng NextVolu me ProcName
0 59.1 4.83 39.1 0.511 0 0
0 voxels _P initStep
1 60 5.43 39.1 0.511 0 1.05
1.05 voxels _P Transportation
*** Break *** segmentation violation
Aborted (core dumped)
The simulation is using both voxelized phantom and source, based on the
example files "VoxelizedPhantom.mac" and "VoxelizedSource.mac", and it
seems that the problem arises from the Voxelized Phantom, as when I
substitute it for a cylinder the error disappears and the simulation
runs withou any problem.
I attach the full macro that I am using, just in case it helps, but
probably the mistake is in the lines related with the phantom:
# Insert a replica-based voxel-matrix geometry
/gate/world/daughters/insert replicaMatrix
/gate/replicaMatrix/geometry/insertReader interfile
/gate/replicaMatrix/interfileReader/insertTranslator range
/gate/replicaMatrix/interfileReader/rangeTranslator/readTable
range_vox.dat
/gate/replicaMatrix/interfileReader/rangeTranslator/describe 1
# Hoffman Brain Phantom - Interfile format
/gate/replicaMatrix/interfileReader/readFile hof3.h33
/gate/replicaMatrix/interfileReader/describe 1
/gate/replicaMatrix/attachPhantomSD
If anybody knows what I am doing wrong, or has succesfully run a
simulation with voxelized phantom, I would appreciate any help!
By the way, what is the difference between the object "replicaMatrix"
and "matrix"? Can the later also be used for reading voxelized phantoms
from Interfile files?
Thanks in advance!!
Regards,
Jose L. Rubio
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