[gate-users] GATE Installation

[Corinne J Groiselle]

I agree with Ross! ;-) 
I had the same problem the first time I installed GATE.

Either you modify env_gate.csh and put the path of the G4 env.csh file 
or you just create a symbolic link in $G4INSTALL as it's where GATE is 
looking for the file by default.

Actually, I solved the problem by doing all the sourcing every time I 
open a new xterm window by modifying the .bashrc file and including the 
following lines:

# source ROOT
source /sullivan/corinne/MonteCarloSimulator/env_files/env_root.sh
# source CLHEP
source /sullivan/corinne/MonteCarloSimulator/env_files/env_CLHEP.sh
# source LMF
source /sullivan/corinne/MonteCarloSimulator/env_files/env_lmf.sh
# source ecat
source /sullivan/corinne/MonteCarloSimulator/env_files/env_ecat7.sh
# source geant
source 
/sullivan/corinne/MonteCarloSimulator/geant4/.config/bin/Linux-g++/env.sh
# source Gate
export G4VERSION=5.2
export GATEHOME=/sullivan/corinne/MonteCarloSimulator/petsim
source /sullivan/corinne/MonteCarloSimulator/env_files/env_gate.sh
                                                                                

That way, I am sure I won't forget to source the different env files 
before I begin a simulation!

-- Corinne

Schmidtlein, Ross/Medical Physics wrote:

>Look in ./geant4.5.2.p02/.config/bin/Linux-g++/
>
>It should be there.
>
>ross
>
>-----Original Message-----
>From: gate-users-bounces at lphe1pet1.epfl.ch
>[mailto:gate-users-bounces at lphe1pet1.epfl.ch] On Behalf Of Michal
>Lijowski
>Sent: Friday, July 30, 2004 1:28 PM
>To: gate-users at lphe1pet1.epfl.ch
>Subject: [gate-users] GATE Installation
>
>
>I have been trying to install gate_v1.0.1 on Red Hat Fedora Core 2 with
>gcc 3.3.3. I have modified the env_gate.csh script so I can run the
>script in bash shell. The script is in attachment. 
>
>The installed GEANT version is 4.5.2p02. My question is about 
>GEANT configuration file which is invoked in env_gate.csh script. The
>only env.csh file in this GEANT version is in 
>geant4.5.2.p02/examples/extended/biasing/B03/env.csh directory. Which
>GEANT file is appropriate configuration file to be used for 
>GATE configuration?
>
>Thank you,
>
>Michal Lijowski
>
>
>
> 
>     =====================================================================
>     
>     Please note that this e-mail and any files transmitted with it may be 
>     privileged, confidential, and protected from disclosure under 
>     applicable law. If the reader of this message is not the intended 
>     recipient, or an employee or agent responsible for delivering this 
>     message to the intended recipient, you are hereby notified that any 
>     reading, dissemination, distribution, copying, or other use of this 
>     communication or any of its attachments is strictly prohibited.  If 
>     you have received this communication in error, please notify the 
>     sender immediately by replying to this message and deleting this 
>     message, any attachments, and all copies and backups from your 
>     computer.
>
>
>_______________________________________________
>gate-users mailing list
>gate-users at lphe1pet1.epfl.ch
>http://lphe1pet1.epfl.ch/mailman/listinfo/gate-users
>  
>

-- 

------------------------------------------------------------------------
Corinne J. Groiselle, PhD
Research instructor

Division of Nuclear Medicine / Department of Radiology
University of Massachusetts Medical School
55 Lake Avenue North
Worcester, MA 01655
USA

_phone_: (508)-856-6123 - fax: (508)-856-4572
_e-mail_: Corinne.Groiselle at umassmed.edu
_professional homepage_: http://users.umassmed.edu/corinne.groiselle
_personal homepage_: http://corinne.groiselle.free.fr


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.opengatecollaboration.org/mailman/private/gate-users/attachments/20040730/273b1e72/attachment.htm>