[gate-users] Image Reconstruction of Gate output

[Nehmeh, Sadek/Medical Physics]

OK, why don't you make sure if you have the IEImport and IEExport
protocols installed on yor scanner first. Let me know.

	Sadek 

-----Original Message-----
From: gate-users-bounces at lphe1pet1.epfl.ch
[mailto:gate-users-bounces at lphe1pet1.epfl.ch] On Behalf Of Mutanga
Theodore
Sent: Wednesday, December 15, 2004 12:13 PM
To: GATE feedback and helpline for Users
Subject: Re: [gate-users] Image Reconstruction of Gate output

Hello Sadek,
I just got the codes, thanks, as I told you my interest in with the DST
geometry so if you don't mind I wold like to have the other tools.
I plan to export the data ona DST station, since STIR doesn't yet
recognise DST geometry. I could work with Kris on that one but I don't
know how much of programming it will require.

Regards
Theodore


>
> 	Dear Gaters, in particular GE PET users,
>
> 	Please find attached an image reconstruction tool for Gate root 
> output. First untar
>       Gate_Reconstrcution.tar (tar -xvf Gate_Reconstrcution.tar); you 
> should find the following files in
>       the Gate_Reconstrcution:
>
> 	1- GEAdvance3D_Sinogram_Bin.c
> 	2- Gate_To_Stir.c
> 	3- few .par files for STIR based reconstructions
> 	4- README.txt
>
>
> "GEAdvance3D_Sinogram_Bin.c" is mainly to read multiple .root files 
> and bin the data according to the GE Advance/DLS PET scanner. If to be

> used for the GE DST, some defined variables at the beginning of the 
> code need to be modified according to the DST geometry. The DST 
> geometry parameters are included in the file. The binning formulations

> have been approved by GE, and released under GE permission.
>
> "Gate_To_Stir.c" reads the GE Michelogram, and writes it in STIR 
> format for the GE Advance, so that the final output may be 
> reconstructed using STIR.
>
> In README.txt I tried to describe step-by-step how to run these tools,

> and reconstruct the Gate images with STIR. The attached .par files are

> modified copies from the STIR "samples" directory.
>
>
> "GEAdvance3D_Sinogram_Bin.c" also outputs the Gate data in a GE format

> that may be imported to the GE PET scanner console for reconstruction.
> If anybody is interested in doing that please le me know, so that I 
> will provide you with the couple additional tools.
>
> Hope this will be helpful.
>
> P.S. Kris, I would appreciate if you may take a look at my REAME.txt 
> file to make sure I'm not doing something
>      wrong when using STIR.
>
>
> 	Regards,
>
> 	Sadek
>
>
> ----------------------------------------
>  Sadek A. Nehmeh, Ph.D.
>  Assistant Attending Physicist
>  Medical Physics Department
>  Nuclear Medicine Service
>  Memorial Sloan-Kettering Cancer Center
>  Tel: (212)-639-2175
>  Email: nehmehs at mskcc.org
> ------------------------------------------
>
>
>
>
>
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