[gate-users] GATE Installation

Sun Aug 1 16:07:33 CEST 2004

   Corinne,

   I compiled geant4.5.p05 from source and I could compile examples in
   geant4.5.p02/examples/novice/N01 and run them without setting $G4WORKDIR.
   I am out of town for the this week and I won't have access to my
   computer. But you are willing, please send your GEANT "cookbook".
   Thank you,

    Michal

> It's a silly question, but are you sure that everything went well during
> the install and compilation?
> Did you try to run the novice examples?
> I don't know if you're familiar with G4, but you should reinstall
> everything from scratch, and recompile.
> Then you should source G4, go to geant4.5.p02/examples/novice/N01 and
> set $G4WORKDIR to . before you compile and run the example.
> I have a "cookbook" for the G4 install, I can send it to you with the
> parameters I used if you want.
>
> Good luck!
>
> -- Corinne
>
> Michal Lijowski wrote:
>
>>In the geant distribution I have installed the directory
>>geant4.5.2.p02/.config/ is empty.
>>
>>[michal at ml-cvu cern]$ ll  geant4.5.2.p02/.config/
>>total 0
>>
>>Thank you for your prompt response.
>>
>>Michal
>>
>>
>>On Fri, 2004-07-30 at 12:50, Corinne J Groiselle wrote:
>>
>>
>>>I agree with Ross! ;-)
>>>I had the same problem the first time I installed GATE.
>>>
>>>Either you modify env_gate.csh and put the path of the G4 env.csh file
>>>or you just create a symbolic link in $G4INSTALL as it's where GATE is
>>>looking for the file by default.
>>>
>>>Actually, I solved the problem by doing all the sourcing every time I
>>>open a new xterm window by modifying the .bashrc file and including
>>>the following lines:
>>>
>>># source ROOT
>>>source /sullivan/corinne/MonteCarloSimulator/env_files/env_root.sh
>>># source CLHEP
>>>source /sullivan/corinne/MonteCarloSimulator/env_files/env_CLHEP.sh
>>># source LMF
>>>source /sullivan/corinne/MonteCarloSimulator/env_files/env_lmf.sh
>>># source ecat
>>>source /sullivan/corinne/MonteCarloSimulator/env_files/env_ecat7.sh
>>># source geant
>>>source
>>>/sullivan/corinne/MonteCarloSimulator/geant4/.config/bin/Linux-g++/env.sh
>>># source Gate
>>>export G4VERSION=5.2
>>>export GATEHOME=/sullivan/corinne/MonteCarloSimulator/petsim
>>>source /sullivan/corinne/MonteCarloSimulator/env_files/env_gate.sh
>>>
>>>That way, I am sure I won't forget to source the different env files
>>>before I begin a simulation!
>>>
>>>-- Corinne
>>>
>>>Schmidtlein, Ross/Medical Physics wrote:
>>>
>>>
>>>>Look in ./geant4.5.2.p02/.config/bin/Linux-g++/
>>>>
>>>>It should be there.
>>>>
>>>>ross
>>>>
>>>>-----Original Message-----
>>>>From: gate-users-bounces at lphe1pet1.epfl.ch
>>>>[mailto:gate-users-bounces at lphe1pet1.epfl.ch] On Behalf Of Michal
>>>>Lijowski
>>>>Sent: Friday, July 30, 2004 1:28 PM
>>>>To: gate-users at lphe1pet1.epfl.ch
>>>>Subject: [gate-users] GATE Installation
>>>>
>>>>
>>>>I have been trying to install gate_v1.0.1 on Red Hat Fedora Core 2 with
>>>>gcc 3.3.3. I have modified the env_gate.csh script so I can run the
>>>>script in bash shell. The script is in attachment.
>>>>
>>>>The installed GEANT version is 4.5.2p02. My question is about
>>>>GEANT configuration file which is invoked in env_gate.csh script. The
>>>>only env.csh file in this GEANT version is in
>>>>geant4.5.2.p02/examples/extended/biasing/B03/env.csh directory. Which
>>>>GEANT file is appropriate configuration file to be used for
>>>>GATE configuration?
>>>>
>>>>Thank you,
>>>>
>>>>Michal Lijowski
>>>>
>>>>
>>>>
>>>>
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>>>--
>>>
>>>
>>>______________________________________________________________________
>>>Corinne J. Groiselle, PhD
>>>
>>>Research instructor
>>>
>>>Division of Nuclear Medicine / Department of Radiology
>>>University of Massachusetts Medical School
>>>55 Lake Avenue North
>>>Worcester, MA 01655
>>>USA
>>>
>>>phone: (508)-856-6123 - fax: (508)-856-4572
>>>e-mail: Corinne.Groiselle at umassmed.edu
>>>professional homepage: http://users.umassmed.edu/corinne.groiselle
>>>personal homepage: http://corinne.groiselle.free.fr
>>>
>>>
>>>
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>>>
>>
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>
> --
>
> ------------------------------------------------------------------------
> Corinne J. Groiselle, PhD
> Research instructor
>
> Division of Nuclear Medicine / Department of Radiology
> University of Massachusetts Medical School
> 55 Lake Avenue North
> Worcester, MA 01655
> USA
>
> _phone_: (508)-856-6123 - fax: (508)-856-4572
> _e-mail_: Corinne.Groiselle at umassmed.edu
> _professional homepage_: http://users.umassmed.edu/corinne.groiselle
> _personal homepage_: http://corinne.groiselle.free.fr
>
>
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