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Hi Sarah,
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<div>You have the output disabled. Remove /gate/application/noGlobalOutput from your macro and try again.<br>
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Best,<br>
<div dir="ltr">Matthew</div>
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<blockquote type="cite">On Dec 13, 2021, at 6:19 AM, Sarah Blind <sarah.blind@univ-lorraine.fr> wrote:<br>
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<span style="font-weight:bold;font-size:12px;">CAUTION:</span> The Sender of this email is not from within Dalhousie.</div>
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<div>Dear Gate users,</div>
<div><br data-mce-bogus="1">
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<div>I am trying to follow the exercices (1 and 2) of <a href="https://davidsarrut.pages.in2p3.fr/gate-exercices-site/docs/welcome/">
https://davidsarrut.pages.in2p3.fr/gate-exercices-site/docs/welcome/</a>.<br data-mce-bogus="1">
</div>
<div>When I open the output files (with ImageJ) I obtain only 0 values. <br data-mce-bogus="1">
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<div>Does anyone have any idea why those dose distribution values are all zero?<br data-mce-bogus="1">
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<div><br>
<br>
# Visualization<br>
/vis/open OGLIQt<br>
/vis/drawVolume<br>
/vis/viewer/flush<br>
/tracking/storeTrajectory 1<br>
/vis/scene/add/trajectories<br>
/vis/scene/endOfEventAction accumulate<br>
/vis/modeling/trajectories/create/drawByParticleID<br>
<br>
/gate/geometry/setMaterialDatabase ../data/GateMaterials.db<br>
<br>
# World<br>
/gate/world/geometry/setXLength 1 m<br>
/gate/world/geometry/setYLength 1 m<br>
/gate/world/geometry/setZLength 1 m<br>
/gate/world/setMaterial Air<br>
<br>
# Water Box<br>
/gate/world/daughters/name waterbox<br>
/gate/world/daughters/insert box<br>
/gate/waterbox/geometry/setXLength 40 cm<br>
/gate/waterbox/geometry/setYLength 40 cm<br>
/gate/waterbox/geometry/setZLength 40 cm<br>
/gate/waterbox/placement/setTranslation 0 0 25 cm<br>
/gate/waterbox/setMaterial Water<br>
/gate/waterbox/vis/setVisible 1<br>
/gate/waterbox/vis/setColor blue<br>
<br>
# aluminium box<br>
/gate/world/daughters/name alubox<br>
/gate/world/daughters/insert box<br>
/gate/alubox/geometry/setXLength 5 cm<br>
/gate/alubox/geometry/setYLength 5 cm<br>
/gate/alubox/geometry/setZLength 5 cm<br>
/gate/alubox/placement/setTranslation 0 0 15 cm<br>
/gate/alubox/setMaterial Aluminium<br>
/gate/alubox/vis/setVisible 1<br>
/gate/alubox/vis/setColor yellow<br>
<br>
#=========<br>
# PHYSICS<br>
#=========<br>
<br>
/gate/physics/addPhysicsList emstandard_opt3<br>
<br>
/gate/physics/Gamma/SetCutInRegion world 10 mm<br>
/gate/physics/Electron/SetCutInRegion world 10 mm<br>
/gate/physics/Positron/SetCutInRegion world 10 mm<br>
<br>
/gate/physics/Gamma/SetCutInRegion waterbox 0.01 mm<br>
/gate/physics/Electron/SetCutInRegion waterbox 0.01 mm<br>
/gate/physics/Positron/SetCutInRegion waterbox 0.01 mm<br>
<br>
/gate/physics/displayCuts<br>
<br>
<br>
#===========<br>
# DETECTORS<br>
#===========<br>
<br>
/gate/actor/addActor DoseActor depthdose<br>
/gate/actor/depthdose/save output/gamma-depth.txt<br>
/gate/actor/depthdose/attachTo waterbox<br>
/gate/actor/depthdose/stepHitType random<br>
/gate/actor/depthdose/setPosition 0 0 0 cm<br>
/gate/actor/depthdose/setResolution 1 1 100<br>
/gate/actor/depthdose/saveEveryNSeconds 60<br>
/gate/actor/depthdose/enableEdep true<br>
/gate/actor/depthdose/enableUncertaintyEdep true<br>
/gate/actor/depthdose/enableDose true<br>
/gate/actor/depthdose/enableUncertaintyDose true<br>
/gate/actor/depthdose/enableNumberOfHits true<br>
<br>
/gate/actor/addActor DoseActor doseprofile<br>
/gate/actor/doseprofile/save output/gamma-profile.txt<br>
/gate/actor/doseprofile/attachTo waterbox<br>
/gate/actor/doseprofile/stepHitType random<br>
/gate/actor/doseprofile/setPosition 0 0 4 cm<br>
/gate/actor/doseprofile/setResolution 100 1 1<br>
/gate/actor/doseprofile/setSize 5 40 40 cm<br>
/gate/actor/doseprofile/saveEveryNSeconds 60<br>
/gate/actor/doseprofile/enableEdep true<br>
/gate/actor/doseprofile/enableUncertaintyEdep true<br>
/gate/actor/doseprofile/enableDose true<br>
/gate/actor/doseprofile/enableUncertaintyDose true<br>
/gate/actor/doseprofile/enableNumberOfHits true<br>
<br>
/gate/actor/addActor SimulationStatisticActor stat<br>
/gate/actor/stat/save output/gamma-stat.txt<br>
/gate/actor/stat/saveEveryNSeconds 60<br>
<br>
/gate/actor/addActor DoseActor doseDistribution3D_1<br>
/gate/actor/doseDistribution3D_1/save output/doseDistribution3D_1.hdr<br>
/gate/actor/doseDistribution3D_1/attachTo waterbox<br>
/gate/actor/doseDistribution3D_1/stepHitType random<br>
/gate/actor/doseDistribution3D_1/setPosition 0.0 0.0 0.0 um<br>
/gate/actor/doseDistribution3D_1/setSize 40.0 40.0 40.0 um<br>
/gate/actor/doseDistribution3D_1/setResolution 200 200 200<br>
/gate/actor/doseDistribution3D_1/enableDose true<br>
/gate/actor/doseDistribution3D_1/saveEveryNSeconds 60<br>
<br>
<br>
#=============<br>
# INITIALISATION<br>
#==============<br>
<br>
/gate/run/initialize<br>
<br>
#================<br>
# BEAMS / SOURCE<br>
#================<br>
<br>
/gate/source/addSource mybeam gps<br>
/gate/source/mybeam/gps/particle gamma<br>
/gate/source/mybeam/gps/pos/type Beam<br>
/gate/source/mybeam/gps/pos/rot1 1 1 1<br>
#/gate/source/mybeam/gps/pos/rot2 0 0 0<br>
/gate/source/mybeam/gps/pos/shape Circle<br>
/gate/source/mybeam/gps/pos/centre 0 0 0 mm<br>
/gate/source/mybeam/gps/pos/sigma_x 3 mm<br>
/gate/source/mybeam/gps/pos/sigma_y 3 mm<br>
/gate/source/mybeam/gps/ene/mono 10 MeV<br>
/gate/source/mybeam/gps/ene/type Gauss<br>
/gate/source/mybeam/gps/ene/sigma 1.0 MeV<br>
/gate/source/mybeam/gps/direction 0 0 1<br>
<br>
<br>
#=============<br>
# START BEAMS<br>
#=============</div>
<div><br>
/gate/random/setEngineName MersenneTwister<br>
/gate/random/setEngineSeed auto<br>
<br>
/gate/application/noGlobalOutput<br>
/gate/application/setTotalNumberOfPrimaries 1<br>
/gate/application/start<br>
<br>
<br data-mce-bogus="1">
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<div data-marker="__SIG_POST__">Many thanks for your help,<br>
</div>
<div data-marker="__SIG_POST__"><br data-mce-bogus="1">
</div>
<div data-marker="__SIG_POST__">Sarah Blind<br data-mce-bogus="1">
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<span>Gate-users@lists.opengatecollaboration.org</span><br>
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