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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Hi there,
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">I don’t really work with carbon ion beams but from my experience with protons, I would say that these differences in the peak position/range
are due to the I-values and consequently stopping powers calculated in GATE (for some physics lists).
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">I suggest you check the I-value (and of course the elemental composition) of the PMMA material you have in the other Monte Carlo code
and then force the I-value to be the same in GATE using the following command:<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">/gate/geometry/setIonisationPotential SOME_MATERIAL 78 eV<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Hope this helps.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Kind regards,
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Daniela
<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><o:p> </o:p></span></p>
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<p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> Gate-users <gate-users-bounces@lists.opengatecollaboration.org>
<b>On Behalf Of </b>hao qiushi<br>
<b>Sent:</b> 29 July 2021 04:06<br>
<b>To:</b> gate-users@lists.opengatecollaboration.org<br>
<b>Subject:</b> [Gate-users] The question of the peak position of dose deposition<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><span class="tgt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">Dear GATE expert,</span></span><o:p></o:p></p>
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<p class="MsoNormal"><span class="tgt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">I used GATE to simulate carbon ion beam to hit PMMA target, but the peak position of ion beam dose deposition was always a
little smaller than the results I got with other Monte Card software. The peak position of 100AMeV beam should be 22mm, but the peak position I got with GATE was 21.5mm.The 300AMeV beam should peak at 148mm, but GATE gets 144mm.I don't know where I made a
mistake, could you please help me check the macro file,thanks in advance.</span></span><o:p></o:p></p>
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</span><o:p></o:p></p>
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<p class="MsoNormal"><span class="tgt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">The file content is as follows</span></span><span class="tgt"><span lang="ZH-CN" style="font-size:10.0pt;color:#333333;background:#F7F8FA">：</span></span><o:p></o:p></p>
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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><br>
<br>
</span><o:p></o:p></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span class="tgt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/control/execute mac/verbose.mac
<o:p></o:p></span></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/control/execute mac/visu.mac</span><o:p></o:p></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/geometry/setMaterialDatabase data/GateMaterials.db<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># World=======================<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/geometry/setXLength 2 m<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/geometry/setYLength 2 m<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/geometry/setZLength 2 m<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/setMaterial Vacuum<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># PMMA===================<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/daughters/name pmma<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/world/daughters/insert box<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/pmma/geometry/setXLength 10 cm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/pmma/geometry/setYLength 10 cm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/pmma/geometry/setZLength 20 cm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/pmma/placement/setTranslation 0.0 0.0 50 cm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/pmma/setMaterial PMMA<o:p></o:p></span></p>
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<div>
<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># PHYSICS=========<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/physics/addPhysicsList QGSP_BERT_EMV<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/physics/addPhysicsList QGSP_BERT_HP<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># output===================<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/addActor DoseActor doseDistribution<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/save output_txt/output-C100.mhd<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/attachTo <span class="apple-tab-span">
</span><span class="apple-converted-space"> </span> pmma<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/stepHitType random<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/setPosition 0 0 0 cm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/setResolution 100 100 2000<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/enableEdep true<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/enableDose true<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/doseDistribution/enableNumberOfHits true<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/addActor SimulationStatisticActor stat<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/stat/save output_txt/stat-C100.txt<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/actor/stat/saveEveryNSeconds 60<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># INITIALISATION============<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/run/initialize<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"># BEAMS==================<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setIonProperties 6 12 6 0<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setEnergy 3600 MeV<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setSigmaEnergy 2 MeV<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setPosition 0 0 0 mm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setSigmaX 10 mm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setSigmaY 10 mm<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setSigmaTheta 0.01 mrad<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setSigmaPhi 0.01 mrad<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setEllipseXThetaEmittance 0.01 mm*mrad<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/source/mybeam/setEllipseYPhiEmittance 0.01 mm*mrad<o:p></o:p></span></p>
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# random ==========<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/random/setEngineName MersenneTwister<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/random/setEngineSeed auto<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><o:p> </o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/application/noGlobalOutput<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/application/setTotalNumberOfPrimaries 200000<o:p></o:p></span></p>
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<p class="MsoNormal" style="line-height:19.5pt"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA">/gate/application/start<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial",sans-serif;color:#333333;background:#F7F8FA"><br>
<br>
</span><o:p></o:p></p>
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