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<div dir="ltr">Thank you, hsl...!</div>
<div dir="ltr"><br>
</div>
<div dir="ltr">Anyway, may I ask some more general questions?</div>
<div dir="ltr"><span style="font-size:12pt"><br>
</span></div>
<div dir="ltr"><span style="font-size:12pt"> 1. I plan to use GATE for one definite purpose. I am to simulate microCT acquisitions with mathematical phantoms which means that I need to be able to simulate</span></div>
<div dir="ltr"><span style="font-size:12pt"> - X-ray source with spectrum.</span></div>
<div dir="ltr"><span style="font-size:12pt"> - Interaction </span><span style="font-size:12pt">of X-ray and matter below 130keV, i.e. photoelectric effect, Compton- and Raleigh-scatter.</span></div>
<div dir="ltr"><span style="font-size:12pt"> - Detector response.</span></div>
<div dir="ltr"><span style="font-size:12pt"> In this case what flags and settings do you recommend for GEANT4 and GATE4 build?</span></div>
<div dir="ltr"><span style="font-size:12pt"><br>
</span></div>
<div dir="ltr"><span style="font-size:12pt"> 2. Anyway, how can I find out myself such dependencies? Meanwhile I succeeded to compile GEANT4 with the following flags:</span></div>
<div dir="ltr"><span style="font-size:12pt"><span>sudo cmake -DCMAKE_INSTALL_PREFIX=/PAHT/TO/geant4/geant4-install/ -DGEANT4_INSTALL_DATA=ON -DGEANT4_USE_QT=ON -DGEANT4_USE_OPENGL_X11=ON -DGEANT4_USE_SYSTEM_EXPAT=OFF CMAKE_BUILD_TYPE=RelWithDebInfo GEANT4_BUILD_MULTITHREADED=ON
GEANT4_USE_RAYTRACER_X11=ON GEANT4_USE_INVENTOR=ON GEANT4_USE_XM=ON /PATH/TO/geant4/geant4/</span><br>
</span></div>
<div dir="ltr"><span style="font-size:12pt"><span><br>
</span></span></div>
<div dir="ltr"><span style="font-size:12pt"><span>However, this case my GATE compilation crashes with meaningless error message. It would be really demanding to try out one-by-one which flag is really helpful in my cas</span></span><span style="font-size:12pt">e
and which causes the crash. It is very likely, that crash is caused by some settings which are, on the other hand, absolutely useless for X-ray modelling in GATE.</span></div>
<div dir="ltr"><span style="font-size:12pt"><br>
</span></div>
<div dir="ltr">
<div>Hoping that my point is clear,</div>
<div>Gabor</div>
<div><br>
</div>
</div>
<div dir="ltr"><br>
</div>
<font color="#002060" face="arial">
<p style="FONT-SIZE: 10pt; FONT-FAMILY: Arial"><b><span style="FONT-SIZE: 15px; TEXT-TRANSFORM: capitalize">Gábor</span> <span style="FONT-SIZE: 15px; TEXT-TRANSFORM: uppercase">Légrádi</span></b><br>
<span style="FONT-SIZE: 15px; TEXT-TRANSFORM: capitalize">Product Development Manager</span></p>
<p style="FONT-SIZE: 10pt; FONT-FAMILY: Arial"><span style="FONT-SIZE: 14px"><a href="https://www.3dhistech.com/">3DHISTECH Ltd.</a><br>
H-1141 Budapest, Öv utca 3., HUNGARY<br>
Jabber: <a href="xmpp:%%Email%%">gabor.legradi@3dhistech.com</a><br>
Phone: +36 1 467-5600<br>
Fax: +36 1 445-0920<br>
</span></p>
<p style="FONT-SIZE: 10pt; FONT-FAMILY: Arial"><span style="FONT-SIZE: 14px"><a href="https://twitter.com/3DHISTECH_LTD"><img border="0" alt="3DHISTECH Twitter" src="cid:c7dcba3f-543d-4ce0-94e4-89c46bd56b07.png" width="24" height="24"></a><a href="https://www.linkedin.com/company/3dhistech-ltd-/"><img border="0" alt="3DHISTECH Linkedin" src="cid:1fed76bc-471a-4368-a0d9-beacfcedad45.png" width="24" height="24"></a><a href="https://www.facebook.com/3DHISTECH/"><img border="0" alt="3DHISTECH Facebook" src="cid:6541aae1-dc20-4094-ba81-2457709de827.png" width="24" height="24"></a><a href="https://www.instagram.com/3dhistech/"><img border="0" alt="3DHISTECH Instagram" src="cid:8d6f8b70-e154-4830-98d0-3273539a91b4.png" width="24" height="24"></a> <a href="https://www.youtube.com/user/3DHISTECH"><img border="0" alt="3DHISTECH Youtube" src="cid:81733003-d740-44dc-a9b7-c4f6d8b9df38.png" width="24" height="24"></a><a href="https://www.3dhistech.com/"><img border="0" alt="3DHISTECH Website" src="cid:daf7c96d-6cdb-4142-aecf-22825d78717a.png" width="24" height="24"></a></span></p>
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<div class="x_gmail_quote">
<div dir="ltr" class="x_gmail_attr">On Sat, Oct 10, 2020 at 11:47 AM hsl1196997465@gmail.com <hsl1196997465@gmail.com> wrote:<br>
</div>
<blockquote class="x_gmail_quote" style="margin:0px 0px 0px 0.8ex; border-left:1px solid rgb(204,204,204); padding-left:1ex">
<div>RTK is required for this function, you should install ITK with RTK ON firstly, and recompile Gate with ITK ON .</div>
<div><br>
</div>
<div>
<div style="font-size:12px; padding:2px 0px">---Original---</div>
<div style="font-size:12px; background:rgb(240,240,240); color:rgb(33,33,33); border-radius:4px; line-height:1.5; padding:8px">
<div><b>From:</b> "Gábor Légrádi"<<a href="mailto:gabor.legradi@3dhistech.com" target="_blank">gabor.legradi@<wbr>3dhistech.com</a>></div>
<div><b>Date:</b> Sat, Oct 10, 2020 06:41 AM</div>
<div><b>To:</b> "<a href="mailto:gate-users@lists.opengatecollaboration.org" target="_blank">gate-users@lists.<wbr>opengatecollaboration.org</a>"<<a href="mailto:gate-users@lists.opengatecollaboration.org" target="_blank">gat<wbr>e-users@lists.<wbr>opengatecollaboration.org</a>>;</div>
<div><b>Subject:</b> [Gate-users] Actor type: FixedForcedDetectionActor does not exist!</div>
</div>
<br>
Dear All,<br>
<br>
I am new to GATE. Until now, <wbr>I have been playing with <wbr>vGATE, on Virtual Machine. <wbr>Now I am testing my newly <wbr>compiled GATE on my host <wbr>machine. I tried to execute a <wbr>macro which runs properly on <wbr>vGATE. You may find it in <wbr>GateContrib Github folder: <a href="https://github.com/OpenGATE/GateContrib/tree/master/imaging/CT/fixedForcedDetectionCT" target="_blank">htt<wbr>ps://github.com/OpenGATE/<wbr>GateContrib/tree/master/<wbr>imaging/CT/<wbr>fixedForcedDetectionCT</a> .<br>
<br>
On my host Gate can not <wbr>accomplish this line:<br>
/gate/actor/addActor <wbr>FixedForcedDetectionActor ffda<br>
Warning message:<br>
*** WARNING *** Actor type:<wbr> FixedForcedDetectionActor <wbr>does not exist!<br>
<br>
And then, naturally, ffda can <wbr>not be attached and Gate <wbr>stops with error:<br>
/gate/actor/ffda/attachTo <wbr> world<br>
[G4-cerr] command not found<br>
<br>
Any hint?<br>
<br>
I installed the whole stuff <wbr>on Ubuntu 20.04. Here are my <wbr>notes about the installation:<br>
<br>
<br>
**** GEANT4 ****<br>
sudo apt-get update<br>
sudo apt upgrade<br>
sudo apt install cmake<br>
<br>
Downloaded and unzipped: <a href="https://geant4.web.cern.ch/support/download" target="_blank">https<wbr>://geant4.web.cern.ch/support/<wbr>download</a> -> GNU or Linux tar <wbr>format, compressed using gzip <wbr>(33.2Mb, 34833550 bytes)<br>
<br>
[...]<br>
<br>
cmake command:<br>
cmake -DCMAKE_INSTALL_PREFIX=/<wbr>home/lg/geant4.10.06.p02 -<wbr>DGEANT4_INSTALL_DATA=ON -<wbr>DGEANT4_USE_SYSTEM_EXPAT=OFF /<wbr>home/lg/work/geant4.10.06.p02<br>
<br>
make -j4<br>
make install<br>
<br>
**** ROOT ****<br>
sudo apt-get install libx11-<wbr>dev libxpm-dev libxft-dev <wbr>libxext-dev libssl-dev (<wbr>elvileg dpkg-dev cmake g++ <wbr>gcc binutils már fenn vannak)<br>
<br>
Binary loaded from here and <wbr>extracted: <a href="https://root.cern/install/all_releases/" target="_blank">https://root.cern/<wbr>install/all_releases/</a> -> <wbr>Release 6.22/02 - 17 Aug 2020<br>
<br>
**** GATE ****<br>
sudo apt install cmake-curses-<wbr>gui<br>
sudo apt-get install libxml2-<wbr>dev<br>
sudo apt-get install libc6-<wbr>dev libssl-dev dpkg-dev <wbr>debhelper fakeroot libxml2-<wbr>dev libxslt1-dev<br>
<br>
Downloaded and extracted: <a href="https://github.com/OpenGATE/Gate/archive/v9.0.zip" target="_blank">http<wbr>s://github.com/OpenGATE/Gate/<wbr>archive/v9.0.zip</a><br>
<br>
[...]<br>
<br>
cd gate_v9.0<br>
ccmake ../Gate-9.0-dwnld<br>
<br>
Then I set these settings:<br>
BUILD_TESTING: ON<br>
CMAKE_BACKWARD_COMPATIBILITY: <wbr>2.4<br>
CMAKE_BUILD_TYPE: Release<br>
CMAKE_INSTALL_PREFIX: <br>
EXECUTABLE_OUTPUT_PATH: <br>
GATE_COMPILE_WITH_NATIVE: OFF<br>
GATE_DOWNLOAD_BENCHMARKS_DATA:<wbr> ON<br>
GATE_USE_DAVIS: OFF<br>
GATE_USE_ECAT7: OFF<br>
GATE_USE_GEANT4_UIVUS: ON<br>
GATE_USE_ITK: OFF<br>
GATE_USE_LMF: OFF<br>
GATE_USE_OPTICAL: ON<br>
GATE_USE_RTK: OFF<br>
GATE_USE_SYSTEM_CLHEP: OFF<br>
GATE_USE_TORCH: OFF<br>
GATE_USE_XRAYLIB: OFF<br>
Geant4_DIR: <br>
LIBRARY_OUTPUT_PATH: <br>
ROOTCINT_EXECUTABLE: <br>
<br>
g: Generate and exit<br>
<br>
make -j4<br>
make install<br>
<br>
source /home/lg/root/bin/<wbr>thisroot.sh<br>
source /home/lg/geant4.10.06.<wbr>p02/bin/geant4.sh<br>
export PATH=$PATH:/home/lg/<wbr>gate_v9.0/bin<br>
<br>
Gábor Légrádi<br>
Product Development Manager<br>
3DHISTECH Ltd.<br>
H-1141 Budapest, Öv utca 3., <wbr>HUNGARY<br>
Jabber: <a href="mailto:gabor.legradi@3dhistech.com" target="_blank">gabor.legradi@<wbr>3dhistech.com</a><br>
Phone: +36 1 467-5600<br>
Fax: +36 1 445-0920<br>
<br>
<br>
<br>
</div>
______________________________<wbr>_________________<br>
Gate-users mailing list<br>
<a href="mailto:Gate-users@lists.opengatecollaboration.org" target="_blank">Gate-users@lists.opengatecolla<wbr>boration.org</a><br>
<a href="http://lists.opengatecollaboration.org/mailman/listinfo/gate-users" rel="noreferrer" target="_blank">http://lists.opengatecollabora<wbr>tion.org/mailman/listinfo/<wbr>gate-users</a></blockquote>
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<br>
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<hr tabindex="-1" style="display:inline-block; width:98%">
<div id="x_divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Gate-users <gate-users-bounces@lists.opengatecollaboration.org> on behalf of Gábor Légrádi <gabor.legradi@3dhistech.com><br>
<b>Sent:</b> Saturday, October 10, 2020 12:41:34 AM<br>
<b>To:</b> gate-users@lists.opengatecollaboration.org<br>
<b>Subject:</b> [Gate-users] Actor type: FixedForcedDetectionActor does not exist!</font>
<div> </div>
</div>
</div>
<font size="2"><span style="font-size:10pt;">
<div class="PlainText">Dear All,<br>
<br>
I am new to GATE. Until now, I have been playing with vGATE, on Virtual Machine. Now I am testing my newly compiled GATE on my host machine. I tried to execute a macro which runs properly on vGATE. You may find it in GateContrib Github folder:<a href="https://github.com/OpenGATE/GateContrib/tree/master/imaging/CT/fixedForcedDetectionCT">
https://github.com/OpenGATE/GateContrib/tree/master/imaging/CT/fixedForcedDetectionCT</a> .<br>
<br>
On my host Gate can not accomplish this line:<br>
/gate/actor/addActor FixedForcedDetectionActor ffda<br>
Warning message:<br>
<!> *** WARNING *** <!> Actor type: FixedForcedDetectionActor does not exist!<br>
<br>
And then, naturally, ffda can not be attached and Gate stops with error:<br>
/gate/actor/ffda/attachTo world<br>
[G4-cerr] command </gate/actor/ffda/attachTo world> not found<br>
<br>
Any hint?<br>
<br>
I installed the whole stuff on Ubuntu 20.04. Here are my notes about the installation:<br>
<br>
<br>
**** GEANT4 ****<br>
sudo apt-get update<br>
sudo apt upgrade<br>
sudo apt install cmake<br>
<br>
Downloaded and unzipped: <a href="https://geant4.web.cern.ch/support/download">https://geant4.web.cern.ch/support/download</a> -> GNU or Linux tar format, compressed using gzip (33.2Mb, 34833550 bytes)<br>
<br>
[...]<br>
<br>
cmake command:<br>
cmake -DCMAKE_INSTALL_PREFIX=/home/lg/geant4.10.06.p02 -DGEANT4_INSTALL_DATA=ON -DGEANT4_USE_SYSTEM_EXPAT=OFF /home/lg/work/geant4.10.06.p02<br>
<br>
make -j4<br>
make install<br>
<br>
**** ROOT ****<br>
sudo apt-get install libx11-dev libxpm-dev libxft-dev libxext-dev libssl-dev (elvileg dpkg-dev cmake g++ gcc binutils már fenn vannak)<br>
<br>
Binary loaded from here and extracted: <a href="https://root.cern/install/all_releases/">
https://root.cern/install/all_releases/</a> -> Release 6.22/02 - 17 Aug 2020<br>
<br>
**** GATE ****<br>
sudo apt install cmake-curses-gui<br>
sudo apt-get install libxml2-dev<br>
sudo apt-get install libc6-dev libssl-dev dpkg-dev debhelper fakeroot libxml2-dev libxslt1-dev<br>
<br>
Downloaded and extracted: <a href="https://github.com/OpenGATE/Gate/archive/v9.0.zip">
https://github.com/OpenGATE/Gate/archive/v9.0.zip</a><br>
<br>
[...]<br>
<br>
cd gate_v9.0<br>
ccmake ../Gate-9.0-dwnld<br>
<br>
Then I set these settings:<br>
BUILD_TESTING: ON<br>
CMAKE_BACKWARD_COMPATIBILITY: 2.4<br>
CMAKE_BUILD_TYPE: Release<br>
CMAKE_INSTALL_PREFIX: <IT WAS SET PROPERLY><br>
EXECUTABLE_OUTPUT_PATH: <NONE><br>
GATE_COMPILE_WITH_NATIVE: OFF<br>
GATE_DOWNLOAD_BENCHMARKS_DATA: ON<br>
GATE_USE_DAVIS: OFF<br>
GATE_USE_ECAT7: OFF<br>
GATE_USE_GEANT4_UIVUS: ON<br>
GATE_USE_ITK: OFF<br>
GATE_USE_LMF: OFF<br>
GATE_USE_OPTICAL: ON<br>
GATE_USE_RTK: OFF<br>
GATE_USE_SYSTEM_CLHEP: OFF<br>
GATE_USE_TORCH: OFF<br>
GATE_USE_XRAYLIB: OFF<br>
Geant4_DIR: <IT WAS SET PROPERLY><br>
LIBRARY_OUTPUT_PATH: <NONE><br>
ROOTCINT_EXECUTABLE: <IT WAS SET PROPERLY><br>
<br>
g: Generate and exit<br>
<br>
make -j4<br>
make install<br>
<br>
source /home/lg/root/bin/thisroot.sh<br>
source /home/lg/geant4.10.06.p02/bin/geant4.sh<br>
export PATH=$PATH:/home/lg/gate_v9.0/bin<br>
<br>
Gábor Légrádi<br>
Product Development Manager<br>
3DHISTECH Ltd.<br>
H-1141 Budapest, Öv utca 3., HUNGARY<br>
Jabber: gabor.legradi@3dhistech.com<br>
Phone: +36 1 467-5600<br>
Fax: +36 1 445-0920<br>
<br>
<br>
<br>
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